Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g01425 CCTGAACTCGCTCCTGCACTTCAATTTTGAACTTGACGAGTTTGGAGACGAAGGGAGAGAAACGTAGAGAAGCTGCAACCATGGCTCAGCCTACAACTAACGGTAATGCCGATCTGAATCAGCATCAACATCAGCACCAGCAGCAATGGACGCAGCCGCAGCACTATCAGCAGCAATGGATGGCTACGCAGTATCCGGCTGCAGCCATGGCTATGATGCAGCAGCAAATGATGATGTATCCACAGCATTACATGCCATATGTCCACCATTATCAGCCGCCTCACCAGCAGCTCAAGCTGCCGCCATCGCCGCATCAGCAGCACCAGCAGAAACAGGGTTCCACGGATGAGATCAGGACGATCTGGCTTGGTGACCTTCATCATTGGATGGATGAGAACTATCTGCACAGTTGTTTTGCTCACACAGGCGAGGTTGTATCAGTCAAGGTTATCCGAAACAAGCAAACTGCTCAGTCGGAGGGATATGGATTTGTGGAGTTTTATTCCCGTGCAACGGCAGAAAAAGTTTTGGAGAGCTTTAATGGTACAATGATGCCAAATGCCGATCAGCCATTTCGATTAAATTGGGCTATTTTCAGTGCTGGTGATAGGAGATCTGATTCTAATTCTGATCTCTCTATATTTGTGGGCGACCTGGCCATAGATGTTACTGATGCTATGCTGCAGGAAACCTTTGCTAGCAGATATTCATCTGTTAAGGGGGCAAAAGTTGTCATTGATTCAAATACTGGCCGTTCAAAAGGTTATGGTTTTGTTAGGTTTGGTGATGAAAATGAGAGAACAAGGGCAATGACTGAAATGAATGGCGTTTATTGTTCAAGTAGGCCTATGCGAATAGGTGTTGCAACGCCCAAGAAATCGTATGGATATCAACAACAATATTCCTCACAAGCTGTTGTATTGGCTGGTGGACATTCATCTAATGGTGCTATGGGCCAAGGTTCCCAGTCTGAAGGGGAATTTACTAACACAACTATATTTGTTGGGGGGCTTGACTCTGACGTCAGTGATGAAGATCTCAGACAACCATTTTTGCAATTTGGTGAAGTTGTTTCTGTAAAAATACCAGTGGGTAAAGGGTGTGGTTTTGTTCAATTTGCTGACAGAAAAAATGCTGAGGAAGCAATTCAGGGATTGAATGGGACAGTAATTGGGAAGCAGACAGTGCGCCTTTCTTGGGGTCGCACTCCTGGAAATAAGCATTGGAGGATGGATTCCAATAACCAGTGGAACGGAAACCATTATGGAGGCCATGGGTATGGTGTGAGGCAGAATCATGATGTAAGTATGCATACTGCTGCTACAGTTCAAGGGGCTTCCTAGTGGCAGTGTAGCAATTGCAAACAACCCAAGCAAACTCAAAATTGTTGTAGGATGGATAACTAAAACTATAGTTTTCTGAATTTTGTAACTGGGTTATATTGGGTGTACGAGGTATAAAGATTATATTAATATGTCATTTGAAATTTTGGGTGTGCCTGAACATATTTTTGATATGGTTTAGATAC 1528 0.4411 MAQPTTNGNADLNQHQHQHQQQWTQPQHYQQQWMATQYPAAAMAMMQQQMMMYPQHYMPYVHHYQPPHQQLKLPPSPHQQHQQKQGSTDEIRTIWLGDLHHWMDENYLHSCFAHTGEVVSVKVIRNKQTAQSEGYGFVEFYSRATAEKVLESFNGTMMPNADQPFRLNWAIFSAGDRRSDSNSDLSIFVGDLAIDVTDAMLQETFASRYSSVKGAKVVIDSNTGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRPMRIGVATPKKSYGYQQQYSSQAVVLAGGHSSNGAMGQGSQSEGEFTNTTIFVGGLDSDVSDEDLRQPFLQFGEVVSVKIPVGKGCGFVQFADRKNAEEAIQGLNGTVIGKQTVRLSWGRTPGNKHWRMDSNNQWNGNHYGGHGYGVRQNHDVSMHTAATVQGAS 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g01425 420 Gene3D - 285 407 IPR012677 -
Bach7g01425 420 PANTHER TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED 81 380 - -
Bach7g01425 420 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 92 172 IPR000504 GO:0003723
Bach7g01425 420 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 185 264 IPR000504 GO:0003723
Bach7g01425 420 Gene3D - 91 171 IPR012677 -
Bach7g01425 420 MobiDBLite consensus disorder prediction 66 88 - -
Bach7g01425 420 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 94 160 IPR000504 GO:0003723
Bach7g01425 420 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 187 256 IPR000504 GO:0003723
Bach7g01425 420 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 306 369 IPR000504 GO:0003723
Bach7g01425 420 Gene3D - 172 276 IPR012677 -
Bach7g01425 420 CDD RRM2_SECp43_like 184 263 - -
Bach7g01425 420 CDD RRM1_SECp43_like 93 173 - -
Bach7g01425 420 MobiDBLite consensus disorder prediction 74 88 - -
Bach7g01425 420 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 304 376 IPR000504 GO:0003723
Bach7g01425 420 CDD RRM3_NGR1_NAM8_like 303 374 - -
Bach7g01425 420 FunFam Polyadenylate-binding protein RBP47B 91 171 - -
Bach7g01425 420 SUPERFAMILY RNA-binding domain, RBD 295 402 IPR035979 GO:0003676
Bach7g01425 420 SUPERFAMILY RNA-binding domain, RBD 169 292 IPR035979 GO:0003676
Bach7g01425 420 FunFam Polyadenylate-binding protein RBP47 286 405 - -
Bach7g01425 420 SMART rrm1_1 305 372 IPR000504 GO:0003723
Bach7g01425 420 SMART rrm1_1 93 168 IPR000504 GO:0003723
Bach7g01425 420 SMART rrm1_1 186 260 IPR000504 GO:0003723
Bach7g01425 420 SUPERFAMILY RNA-binding domain, RBD 60 172 IPR035979 GO:0003676
Bach7g01425 420 MobiDBLite consensus disorder prediction 1 25 - -
Bach7g01425 420 FunFam Polyadenylate-binding protein RBP47B 173 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g01425 Bach-Chr7 24061555 24065385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g01425 94 384 Eukaryotic Initiation Factors Gene Family AT4G34110 29.054 7.62e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g01425 - - gmx:100798089 591.652