Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g01396 ATGCATGGTCAGAGGACTATTGGGTCCTTCCCAGGAATTGTTAGTATGATGCAGGGGCCTAGTTCTAGTGGCTCTGATATGAATCAGCAAACTTCCTTGAGTCACATGCAAAATGCTGTCGATACTCGGTTGCCAGACTATATGGGATCTTCTGGTGAGACTACATGTTTATGTACTAATGGCCCTGATGTTCCGAGCTTCAGCAGCTGGAATAATGGTGAACCAAGTTCTAGATTGAGTCTGCACAATCAAGTCAACGATGATGGGATGAGAACAGAACATGGCCGATCTTCCTTCTGCAGTTCTCAAGCTGAGGGCAATCTCAGACCAGAAGAAAGGCAGTTTGAAACAAATAATTTAATTTTTTCTGTTAATTCAAATACTAATTTACATGGGAATCAACCCACAATCGAGCCCTTATCTTTGCAAGGTTCTGGCCCCAATCATGTTACCCAGAATGTGATTGTAAATATGGGCCAAGTTGCCAACACTGCTAATCGTGGGAAGGGTACAGAAAGTAGTAGTGGTGTTAATATCCGTGATTCCAATGGGTTAAATAAAGAGCATACATCATTTGGCAATGCATCATGTGATCATGTAGGAACTTCATCTGGAAGCTCTGGTCATTGGAGTGGGGGAGATAATGCAAGTCCAAGTTCTTTAGTAAATTGGGGTTCTTCATGCAAGAGAAAGGCCCTTGAAGGTACTTCTGGGCAACTGTGTACAGGAGAAAGCTCAAGCTCTCTTCTTGAAACTGAACATGGTTGCTGGAATACAGGTCTTGCCGATCTTAATGCCTCCAGCAGTTCAAGTGTTTCTACCCCTTTAGAGGATATCACTATTACTAGCCCTTCAGTACATCAGAACTCAAGAAATGAGGTGAGGCAAGTGGCTTCTGATGCATTATCTTTGGTTAGCATTGTGGGAAATGTGGACAGGCCTATGAGAAATTCTGATAGGATGATAAACCATGTACAACGTCAGGAGACTGTACCTTTCAATCTATCATCTACTGGGAGTGGTAGGCATCCTAACCATTCTTCTCCTCTTCAAATACCTAGCTCTCACCCATTTAGTGATTCTTTGGAGTTGAGGTTAACAGCTGGAGTAACAGCAGCCAATTCTACTTCTCCTCAAAGCCAGTCACATGTCTTGCCTGTCCCTGGTTTGTCAGGGAACTTGCATCCTTTTCCATGGAATGGAGCCGCTAATCCAAGGGGCAGCAGCTTATCAAGTTCTTATAACCATGGGGAAAGATCCATACGAGAAGAATTAAACTTAAGAGTCTTCCCAAGAGACAGTACTGAGCACCCCATGCTTGTGCCTGCATCTTCTGGGCATGATCCTTCAAGTTGGCACATGTCCTCTGGTAATATGAACAATTCTGGAGGTGTACCTCCAACATCTTGGATGGGATCCAGTTCAAGCATCCATTCTTTGCCTAATCCCAGCTGGATTGTTCCCCATGAAATCCCAACTCAGAATCAGCAAAGATTATCAGAGTTCAACCCTTGGTCTTTTTTTCCTTCAATTAGCTCTGCATCTAGTGTCCATAATGGCCATTCTGCCTCATCCTCTTCTGGCCCCCCTACCTTTACTCAGGATTCTAGCAACCATCAACCATATCCTAGATCAGCAGCATTTATGGACAGAAGGGGTAATGATGTTTTCAGTGCTCCTCATTCATTGCGAGCTTTAGCTGTGGACATTGAGGGGAGACGCCGACTAATATCTGAGATACGTCAAGTATTGAATGCAATGCGTAGGGGTGAGAACTTACGAGCTGAGGACTATATGCTCTTTGATCCTTTCATATATCATGGCATGGCTGAAATGCATGACAGGCACAGGGACATGCGTCTTGATGTTGATAACATGTCATACGAGGAATTGTTAGCGTTGGAGGAGCGTATAGGGGATGTGAGCACTGGACTAAGTGAGGATGTCATTATGAAGTTGATGAAACAGAGAATCTATGTGTCTCTGATGACAGATTGTTCTAAAGATCTAGAACCCTGCTGTATCTGTCGGGAGGAGTATGCTGATGGAGAGGATGTTGGTTCACTAGATTGTGGGCACGAATTCCACACCAACTGCATCAAGCAGTGGCTAACGCAGAAGAATATGTGCCCTATTTGTAAAACAACAGCCTTGGCTGCATGA 2163 0.4411 MHGQRTIGSFPGIVSMMQGPSSSGSDMNQQTSLSHMQNAVDTRLPDYMGSSGETTCLCTNGPDVPSFSSWNNGEPSSRLSLHNQVNDDGMRTEHGRSSFCSSQAEGNLRPEERQFETNNLIFSVNSNTNLHGNQPTIEPLSLQGSGPNHVTQNVIVNMGQVANTANRGKGTESSSGVNIRDSNGLNKEHTSFGNASCDHVGTSSGSSGHWSGGDNASPSSLVNWGSSCKRKALEGTSGQLCTGESSSSLLETEHGCWNTGLADLNASSSSSVSTPLEDITITSPSVHQNSRNEVRQVASDALSLVSIVGNVDRPMRNSDRMINHVQRQETVPFNLSSTGSGRHPNHSSPLQIPSSHPFSDSLELRLTAGVTAANSTSPQSQSHVLPVPGLSGNLHPFPWNGAANPRGSSLSSSYNHGERSIREELNLRVFPRDSTEHPMLVPASSGHDPSSWHMSSGNMNNSGGVPPTSWMGSSSSIHSLPNPSWIVPHEIPTQNQQRLSEFNPWSFFPSISSASSVHNGHSASSSSGPPTFTQDSSNHQPYPRSAAFMDRRGNDVFSAPHSLRALAVDIEGRRRLISEIRQVLNAMRRGENLRAEDYMLFDPFIYHGMAEMHDRHRDMRLDVDNMSYEELLALEERIGDVSTGLSEDVIMKLMKQRIYVSLMTDCSKDLEPCCICREEYADGEDVGSLDCGHEFHTNCIKQWLTQKNMCPICKTTALAA 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g01396 720 MobiDBLite consensus disorder prediction 164 216 - -
Bach7g01396 720 ProSiteProfiles Zinc finger RING-type profile. 673 714 IPR001841 -
Bach7g01396 720 Pfam Ring finger domain 673 714 IPR001841 -
Bach7g01396 720 MobiDBLite consensus disorder prediction 333 358 - -
Bach7g01396 720 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 224 718 IPR045191 GO:0061630
Bach7g01396 720 SMART ring_2 673 713 IPR001841 -
Bach7g01396 720 SUPERFAMILY RING/U-box 672 717 - -
Bach7g01396 720 MobiDBLite consensus disorder prediction 516 543 - -
Bach7g01396 720 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 636 718 IPR013083 -
Bach7g01396 720 FunFam E3 ubiquitin-protein ligase MBR2 640 718 - -
Bach7g01396 720 MobiDBLite consensus disorder prediction 516 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g01396 Bach-Chr7 23877291 23880690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g01396 17 718 C3H Transcription Factor Family AT2G15530 37.802 3.80e-128 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g01396 - K19041 gmx:100809024 958.747