LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach7g01354	ATGGGTGATCAAGAAAACAATGCGCGCTCAATCTGTGTTTCGAAGAAACGGCCATCGCCGGCGACTGATCATCTTCTGTTCCAGGCATCAAAGAAGCGGGTCCCGTTCGGGGACCTATCAAATTCTCCCAACATCGCATTGAATCAGAGCTCTGATCCCAGCAAAGAGAATACTATCGGGAGGACGAAAAACAAGAAGGATCAGAGTTCGTTGAATCGGCAGAAATTTGCTTGCGAGTCTTCTATATACAAGCATCTTCATGCGTTGGAGATGGACGTGAACAGGAGGCCATTGCTCAGATACATGGAGAAAGTTCAGAAAGATGTTTCGAAGAGCATGCGTGAAATTCTAGTTGATTGGTTAGTGGAGGTTGCAGAGGAATACAAACTGGTTTCTGACACCATTTATCTCGCTGTATCTTATGTTGATAGATTTTTATACATACATGATATCAATAGAAATAGACTTCAGCTGCTCGGTGTTTCTGCTATGCTTATTGCCTCGAAATATGAAGAGATCGCACCTCCAAATGTTGAAGACTTTTGCTATATAACTGATAACTCTTACACCGTCAACGAGGTACACCATCTTTGTCAACTTAAATTGCCTCTTTTCCCCTCCTTTTTATCTCCATTAATCTTCACCAAAGCTGCTCAGGAAAATTTCAAGGGTTCCAAATTGCAGTTGGAATTCATGGCTTCTTATCTTTTGGAGCTAAGCTTGTTAGATATAGGGTGCCTGAAATTTTTGCCATCAGTTGCTGCAGCTTCAGCTTTATTTCTTTCAAGGTTTATATTGGAATCAAAGACGCGTCCTTGGAATCTAGCCTTGCAATGCCATACAGGTTATAAGCCATCTGACTTGAAGGATTGTGTCCTTGCTATGCGTGGCTTGCAATGGAATATCAAAAGAAGCTCTTTACAAGCAGTCCCAGTAAAATACAGTAAAACAAAGTTTATCTGTGTATCATCGTTCACTTCTCCGGATATTCCTGCAAGTTATTTCGAGCCTGTTTATGAATAA	1023	0.4125	MGDQENNARSICVSKKRPSPATDHLLFQASKKRVPFGDLSNSPNIALNQSSDPSKENTIGRTKNKKDQSSLNRQKFACESSIYKHLHALEMDVNRRPLLRYMEKVQKDVSKSMREILVDWLVEVAEEYKLVSDTIYLAVSYVDRFLYIHDINRNRLQLLGVSAMLIASKYEEIAPPNVEDFCYITDNSYTVNEVHHLCQLKLPLFPSFLSPLIFTKAAQENFKGSKLQLEFMASYLLELSLLDIGCLKFLPSVAAASALFLSRFILESKTRPWNLALQCHTGYKPSDLKDCVLAMRGLQWNIKRSSLQAVPVKYSKTKFICVSSFTSPDIPASYFEPVYE	340

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach7g01354	340	PIRSF	Cyclin_A_B_D_E	3	334	IPR046965	GO:0016538\|GO:0044772
	Bach7g01354	340	Pfam	Cyclin, C-terminal domain	214	327	IPR004367	-
	Bach7g01354	340	SMART	cyclin_7	211	297	IPR013763	-
	Bach7g01354	340	SMART	cyclin_7	119	203	IPR013763	-
	Bach7g01354	340	MobiDBLite	consensus disorder prediction	35	72	-	-
	Bach7g01354	340	SMART	Cyclin_C_2	203	328	IPR004367	-
	Bach7g01354	340	Gene3D	-	82	324	-	-
	Bach7g01354	340	MobiDBLite	consensus disorder prediction	58	72	-	-
	Bach7g01354	340	MobiDBLite	consensus disorder prediction	35	57	-	-
	Bach7g01354	340	SUPERFAMILY	Cyclin-like	80	194	IPR036915	-
	Bach7g01354	340	SUPERFAMILY	Cyclin-like	214	329	IPR036915	-
	Bach7g01354	340	FunFam	Cyclin A1	196	324	-	-
	Bach7g01354	340	FunFam	Mitotic cyclin 6	97	195	-	-
	Bach7g01354	340	Pfam	Cyclin, N-terminal domain	82	195	IPR006671	-
	Bach7g01354	340	PANTHER	CYCLINS	66	308	IPR039361	-
	Bach7g01354	340	ProSitePatterns	Cyclins signature.	114	145	IPR006671	-
	Bach7g01354	340	Gene3D	-	95	207	-	-
	Bach7g01354	340	MobiDBLite	consensus disorder prediction	1	23	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach7g01354	Bach-Chr7	23605947	23608997	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach7g01354	1	338	Core Cell Cycle Gene Families	AT1G47230	44.780	5.52e-92	277

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach7g01354	K06627		-	csin:114261114	340.887