Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g01342 TTACAATCCCCTTCGTTTCCACTCTTTATATCTGCTTCTATTCTTATCAGCATTTTCTCGGCTCCATAACAGGGGAACCAATTTGTCTTTTGCGGTGCATGACGAGCGCTTCGGAATTATTCTATAATAGGAGGCATCGTTTGGGACGAACCACGGATGATCTAGGGTTCGATCCCTCTTCCGCTCGAGACCTTATTTTCAATAACCGTCGCCGTCATCATCATCGTCGTCATGATTTGGACGATGGTGAAGATCTGCGACGGCCCACGCATATGCGGCAGCTCTGTCAGCGCGCCTCCCATGCGGATCATGCATCTGGTCGATTTGACCTGGGTTCTAGCTCGTCTCTCTCCAGGAACAGCATCAATGCTTCAGAGAATGTAAGTAGCATAAGTAGTCCTAGAGTGACTGGCAATCAAGGACTGCCCCTATCTGTGACACTTGCAAGGGCAAGACTCGTTGAGAGGTTGAGAGGGGAGCCAATATCTCGAAACAGACAAAGTGGTAGAAGTTCTCTGGGCATTGATGAACCGAGGGGTGTTTACTCTGTGGATCAAGACAGTGAACTCTGGACTTCGCAAATGAGAATATCCCTGTCTGCATCCCAGTCCCAGTTCTTGCAAGAACTGAACATAAAACCCCCTGGACTCACTCAGGAAGCTCTTAACTGTTTGCATGTGGAAGTTTTCAGCCGCAGGGAAACACGAGTGGAAGGATCGCAATCTGGAATAGTGCATGATTGTGGCATATGTTTGGAAGTTTTCTTGGATGGAGATGAATTGATATGCTTGCCATGTGGACACAGATTTCATTCCTGTTGCTTGGTGCCTTGGGTTCGCAGATGTGGGGACTGTCCATTCTGTCGAAGAAGTATAGTTGTTAAGTAGAGTCACGTACCACCAACAGAGGCCAAATAGCTTGTAGATTGGCCTTTTTATGTTATATGCTAAGTTGTGGTTTTCGATAGTGTTATGAACTTGCCTTTTTGTATTCTATGTAACTGTACCTTGAGATTTGGCATATGCAGGGATGACATCCTGCACATGTACTTGTATCCACGTTGATGTAATTATCTTCTCTTGGTCATACCCGGTAATTCTGTGAATATAAAGAAACTGATTA 1122 0.4554 MTSASELFYNRRHRLGRTTDDLGFDPSSARDLIFNNRRRHHHRRHDLDDGEDLRRPTHMRQLCQRASHADHASGRFDLGSSSSLSRNSINASENVSSISSPRVTGNQGLPLSVTLARARLVERLRGEPISRNRQSGRSSLGIDEPRGVYSVDQDSELWTSQMRISLSASQSQFLQELNIKPPGLTQEALNCLHVEVFSRRETRVEGSQSGIVHDCGICLEVFLDGDELICLPCGHRFHSCCLVPWVRRCGDCPFCRRSIVVK 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g01342 262 SUPERFAMILY RING/U-box 214 261 - -
Bach7g01342 262 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 170 260 IPR013083 -
Bach7g01342 262 SMART ring_2 215 255 IPR001841 -
Bach7g01342 262 Pfam Ring finger domain 214 256 IPR001841 -
Bach7g01342 262 ProSiteProfiles Zinc finger RING-type profile. 215 256 IPR001841 -
Bach7g01342 262 MobiDBLite consensus disorder prediction 35 87 - -
Bach7g01342 262 MobiDBLite consensus disorder prediction 44 59 - -
Bach7g01342 262 PANTHER SI:CH211-59O9.10 1 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g01342 Bach-Chr7 23543534 23545975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g01342 1 260 C3H Transcription Factor Family AT1G49850 41.132 3.11e-37 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g01342 - - pcin:129293386 265.388