Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g01216 ATGACCACTTTAAGCACTCCCAACAAGAGTCTAGTTCTTAACAAAATAGACTCTTGCTGGCGCACCAAATCAAATTGGGCATCAAATCGCCAAGCCTTGGCTGATTGTTCTGTTGGCTATGGCAAAGATGCCATCGGTGGCAAGTATGGTGCAATATACAAGGTCACTGACCCCTCTGATGACCCTGTCAACCCCAAACCAGGCACACTTCGTTATGGTGTAATCCAAAACCAACCCCTTTGGATCATTTTCGACAGAGACATGGTTATCATCCTCAAGAATGAGCTTATCATGAATAGCTACAAGACTATTGACGGGAGAGGAGCCAAAGTGGAGATTGCAAATGGGCCCTGCATTACAATTCAAGATGTCAGCCATGTTATTATACATGGCATTAGCATTCATGATTGCAAACCAGGCAAGGCTGCCATGGTGAGGAGTTCCCCAGACCATGTTGGGCATCGTCAAGGATCTGATGGAGATGCCATTAGTATATTTGCTTCCTCAAATATTTGGATTGACCATTGCTTTTTGGCTCGCTGCACTGATGGCCTTATTGATGTTATTCATGCCTCCACTGCGGTTACCATCTCTAACAATTACTTCACTCAGCATGACAAAGTGTTGCTATTAGGACACAACGATGCGTATACAGCAGATAGAATAATGAGAGTGACTATAGCCTTCAACCGTTTTGGTAGTGGCCTAATTGAAAGAATGCCAAGATTTGGTTATGCCCATGTCGTCAACAACAGATATGATGAGTGGCAGATGTATGCCATTGGTGGTAGTGCTAAGCCAAAAATTTTAAGTGAAGGGAACTACTTTACAGCTCCAAATGATCCTAATAAAAAACAGGTTACCAAGAGGGAAGCCAAGAATGGTTGGAAGAATTGGAAATGGAGGTCTTACAAGGAGGCATTCCTCAATGGCGCTTATTTTGTTCCATCTGGGTATGGAAGCTGTGATCCTTATTATACATCTGCTCAATCTTTTATCGCTTCTCCAGCGCCCCTTGTGCCTGCATTAACTCTCAATGCAGGCCCTCTGAGCTGTGTTGCTGGTATTGCATGTTAG 1077 0.4383 MTTLSTPNKSLVLNKIDSCWRTKSNWASNRQALADCSVGYGKDAIGGKYGAIYKVTDPSDDPVNPKPGTLRYGVIQNQPLWIIFDRDMVIILKNELIMNSYKTIDGRGAKVEIANGPCITIQDVSHVIIHGISIHDCKPGKAAMVRSSPDHVGHRQGSDGDAISIFASSNIWIDHCFLARCTDGLIDVIHASTAVTISNNYFTQHDKVLLLGHNDAYTADRIMRVTIAFNRFGSGLIERMPRFGYAHVVNNRYDEWQMYAIGGSAKPKILSEGNYFTAPNDPNKKQVTKREAKNGWKNWKWRSYKEAFLNGAYFVPSGYGSCDPYYTSAQSFIASPAPLVPALTLNAGPLSCVAGIAC 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g01216 358 PRINTS Pollen allergen Amb family signature 159 180 IPR018082 -
Bach7g01216 358 PRINTS Pollen allergen Amb family signature 329 352 IPR018082 -
Bach7g01216 358 PRINTS Pollen allergen Amb family signature 237 256 IPR018082 -
Bach7g01216 358 PRINTS Pollen allergen Amb family signature 95 111 IPR018082 -
Bach7g01216 358 PRINTS Pollen allergen Amb family signature 36 53 IPR018082 -
Bach7g01216 358 PRINTS Pollen allergen Amb family signature 299 323 IPR018082 -
Bach7g01216 358 PRINTS Pollen allergen Amb family signature 59 84 IPR018082 -
Bach7g01216 358 PRINTS Pollen allergen Amb family signature 259 278 IPR018082 -
Bach7g01216 358 PANTHER PECTATE LYASE 18-RELATED 12 355 IPR045032 GO:0030570
Bach7g01216 358 Gene3D - 13 351 IPR012334 -
Bach7g01216 358 SMART amb_all 87 282 IPR002022 -
Bach7g01216 358 Pfam Pectate lyase 95 276 IPR002022 -
Bach7g01216 358 SUPERFAMILY Pectin lyase-like 14 349 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g01216 Bach-Chr7 22610756 22612132 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g01216 11 358 Polysaccharide Lyase AT1G11920 73.504 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g01216 K01728 - gmx:100799106 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach7g01216 7 22610756 22612132 Bach7g01216 7 22610756 22612132 ECH