Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g01200 ATGGAAGGTAGTAGTTCTAATAACAACACTTCCTGTGTGATGGGTTTTGGAGAGAACAGTAGTGGGATATGTCCAATGATGATGATGCCTTTGGTGACTTCTCATCATGGTGGTCATCATCCAATAAATCCTAATCTTAACAATCCTAATGCAGACACAAACAGTCTCTTCCTTCCTATGCCCTGCACTAACCATCACGACTCAAACCGCAATAACACTGGCAGCTCCTCTCTCATGCTTGACAATAACCAAAACAACAACAACAATACTGGGTTAGGGTGTTATTTCATGGAGAGCGACCACAACAACAACGACGGTAGCTCATCTTCTTCTTCTGTCAAGGCTAAGATCATGGCCCATCCTCACTACCATCGTCTCTTGGCTGCCTACGTCAATTGTCAAAAGGTTGGAGCACCTCCTGAAGTGGTGGCAAGGATAGAAGAAGCATGTGCTTCCGCAATGTCAATGGCAGGTCATGCAGCTGGCTCAGCCAGCATAGGTGAAGATCCAGCTCTGGATCAGTTCATGGAAGCTTACTGTGAGATGCTGAACAAGTACGAGCAAGAGCTGTCGAAGCCCTTCAAGGAAGCCATGCTTTTCCTTCAGAGGATCGAGTGTCAGTTTAAGGCTCTCACAATTTCGTCTTCAGACTTCGGTTGTACCGAGGGTGGTGATAGGAATGGATCATCAGAAGAAGATGTGGATGTACAAAACATGATAGACCCTCAGGCGGAGGACAGAGAATTGAAGGGCCAGCTTCTGCGCAGGTACAGCGGATACTTAGGTAGCCTCAAGCAGGAATTCATGAAGAAGAGGAAGAAAGGAAAGCTGCCTAAAGAAGCAAGGCAACAATTGCTTGATTGGTGGAGCAGACATTACAAATGGCCTTACCCATCTGAGTCACAGAAGCTTGCTCTTGCAGAATCAACAGGTCTGGATCAGAAGCAAATCAACAACTGGTTTATTAATCAAAGGAAGAGGCACTGGAAGCCTTCTGAGGACATGCAGTTTGTGGTGATGGATACCACCCATCCCCACTATTACATGGATAATATGTTGGGCACTCCCTTTCCCATGGATCTCTCTCATACAATGCTCTAA 1101 0.4605 MEGSSSNNNTSCVMGFGENSSGICPMMMMPLVTSHHGGHHPINPNLNNPNADTNSLFLPMPCTNHHDSNRNNTGSSSLMLDNNQNNNNNTGLGCYFMESDHNNNDGSSSSSSVKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARIEEACASAMSMAGHAAGSASIGEDPALDQFMEAYCEMLNKYEQELSKPFKEAMLFLQRIECQFKALTISSSDFGCTEGGDRNGSSEEDVDVQNMIDPQAEDRELKGQLLRRYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDTTHPHYYMDNMLGTPFPMDLSHTML 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g01200 366 Pfam KNOX2 domain 165 212 IPR005541 GO:0003677|GO:0005634
Bach7g01200 366 ProSiteProfiles 'Homeobox' domain profile. 268 331 IPR001356 GO:0003677
Bach7g01200 366 FunFam Homeobox protein knotted-1-like 2 273 335 - -
Bach7g01200 366 MobiDBLite consensus disorder prediction 63 83 - -
Bach7g01200 366 SMART ELK_2 248 269 IPR005539 GO:0003677
Bach7g01200 366 SMART KNOX2_2 162 213 IPR005541 GO:0003677|GO:0005634
Bach7g01200 366 SUPERFAMILY Homeodomain-like 270 345 IPR009057 -
Bach7g01200 366 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 66 337 - -
Bach7g01200 366 CDD homeodomain 280 332 IPR001356 GO:0003677
Bach7g01200 366 ProSiteProfiles ELK domain profile. 248 268 IPR005539 GO:0003677
Bach7g01200 366 ProSitePatterns 'Homeobox' domain signature. 306 329 IPR017970 GO:0000981|GO:0006355
Bach7g01200 366 SMART KNOX1_2 111 155 IPR005540 GO:0003677|GO:0005634
Bach7g01200 366 Pfam KNOX1 domain 113 151 IPR005540 GO:0003677|GO:0005634
Bach7g01200 366 Gene3D - 273 335 - -
Bach7g01200 366 Pfam Homeobox KN domain 288 327 IPR008422 GO:0003677|GO:0006355
Bach7g01200 366 SMART HOX_1 270 335 IPR001356 GO:0003677
Bach7g01200 366 Pfam ELK domain 248 269 IPR005539 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g01200 Bach-Chr7 22515575 22519583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g01200 113 366 Homeobox Transcription Factor Family AT1G62360 80.916 2.83e-135 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Bach7g01200 KNOX2 1.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g01200 - - gmx:100805837 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach7g01200 7 22515575 22519583 Bach7g01200 7 22515575 22519583 ECH