Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g01164 ATGTCTATCAGTGACTACTCCGCCGTCGATTACGTTCACCAGCGCGGCGGGGGTGGCAACGGTACTATTACTACCGATCACTATCGTCTCTCTTCGAAGCGTAAATTAGATGATTACGGTCCCAGTTCCGACGATGAAGACGAAGAGTACCAAGATTTTTCTGAGTTAGTCTCCGTCAGAATGAGAAAAGACGAACCCAAAGCCGTCAATTGCTTTTCTGGCGTGAACCCTCGTACCATTAACAATTCTGTGGCAGATGTACATGTTAGAGTCTCTGACGCACAATCCACTTCTTATGCTTGCTCGTCGCAGTCTGAGTTGACTCGTTCATCCTCCAGGTTACAGTTTTTTGTTAGAATGATGTCCAAGGGAAATACGATGGTATTGCAAGCTTGCCCGCAAGATACCGTGAAATCGATTCACGAGCGTATCCAAATAATGAAGGGTATCCCTCTGTTCGAGCAGAGGCTGATATACAGAGGCAAGCAGCTTCAGTGGGAGCAGTCTCTCGCCGAGTGTGACATTCAAAATGATGCTAATCTCCAATTGGTTGGTCGGATGCGAAGCACCGAGCACCCTCTAGCTTGGCAAGTGATAAATGACATGGTGTCACTCATTTTCCGCCTGTGCAGAGGGGAAGTCGAACATGATGCTTTGAAAACCATCAAGGGACTCATTACTAGCTACCTAAACATGACTACCAGACTTGACAATGATTCTGCTTCCGGGTATTTTCAGATTTTCTTGTCTTCATCTGCTCCGGAAGTTCTGATCATGCTCTACATGTCGACATATAGAGGTAACAAAGACTGTGCTGACTATTCAATTAGGCATTTTTTAAGTTCATGTGGCAGTGCCTTGTGTAAATCCTTCCATAGTCAGTGTGCTCGTGTAGTGTTGGAATTCTGTAAACTGCTTAGAAGAGTGGGTAGTGAGGATCCGTTGTATCTCTCTTGTCGGACTACATTTGGGTCTTTATTGGAGACTGCTGGGGTTTCCTACGGTTCTGAAAGTGGTAAAGGTTTGATTCTCATTCAGGAGATTTCCCCATTTGTTCGTGAGCTAGCAAATAGGTTGTTGAAAGATTTGGATTTCAGTATGGAATCCCCATGTAGTGTGGAGCCATTGTTCAGTGATGTTAGTGATTTTATAGCATTCATACTCCCGTTAAGGACTGGAATCAAGGAGCAACAGGTTTGCAATGGTTCTTCCTTACCTGATGGAAAACGTCATAAGCATCTCATACCTGCAGAAGAGATTGAGTACCTTCATCTTATATTTATCGAGTTGTTGAAGAAAATGGATCATTGCCTTCAAAAAATGGAGGAATCCTTGGCTGCGAAGGAAAGAGGTGAAGATGATATGCTTTATTCTGCATGGTCTCACTATCTTTCCATCTTGAAAGAATTGTATCACATTTCTAAGCTCTATGAAGGTGCTGAAGAAGAATTTTGGTCAGTTTTGAGGCGTCAAAGAAGTATGCTCTGTGTACTAATTATTCGATATGCAAGGAGAACAGATGATCATCAGTGGATTCTTGAGCAAAAGAGTGTCACAAATTTCGAATCTAGGAAGCATTTGGCAATGATGATATTCCCTGAGGTAAAAGAAGACTATGAGGAGCTGCATGAGATGCTTATCGACAGGTCTCATTTGTTGGCAGAATCATTTGAGTACATAGCACGAGCAGAACCTGAATCTCTGCATGCAGGTCTTTTTATGGAATTCAAAAATGAGGAAGCGACTGGTCCAGGAGTACTGCGGGAGTGGTTTTTCTTGGTATGTCAAGCAATATTTAATCCCCAAAACGCTCTTTTTGTGGCATGCCCAAATGACCGTAGAAGATTTTTCCCCAATCCTGCATCTAAGGTAGATCCTCTACACCTTGAATACTTCAGTTTCTCTGGTCGTGTTATTGCATTAGCTTTGATGCATAGGGTGCAAGTTGGTATTGTTTTTGATCGTGTGTTTTTCTCACAATTGGCCGGAAACTATATCACTTTAGAAGATATACGGGATGCTGATCCTTGCTTGTATAGTAGTTGCAAGAAGATATTGGAAATGGATGCTGATTTCATTGATTCAGATGCTTTAGGACTGACATTTGTGAGGGAGGTGGAGGAGTTAGGCCACAGGAAAGTGGTTGAACTTTGCCCTGGTGGGAAAAGCCTTCTTGTTAACAGTAAGAACAGGGAGAAGTATGTCGATCTTCTTATACAGGATCATTTTGTAACATCTGTCTCTGAGCAGGTGTCACATTTTTCCCAAGGTTTTGCTGATATTCTAAGCAACTCAAGGCTCCAACAGTTTTTCTTTAAGAGTTTAGAGCTTGAAGATCTTGATTGGATGTTGCATGGGAGTGAAAATATCATTTCCGTTGAAGATTGGAAGGCACATACTGAGTATAATGGCTATCAAGTAACAGATATACAGATATCTTGGTTTTGGGAGATTGTTGGGAGAATGTCAGCTGAACAAAGGAAGATTCTTCTGTTTTTCTGGACATCTGTGAAGTATTTACCAGTTGAAGGTTTTCGTGGTTTGGCCTCTCGTCTCTATATTTACAAGTCCTCAGAACCTGAAGATCGCCTTCCTTCATCTCACACTTGCTTCTACCGGATCTGTTTCCCAACATATTCCTCTATGGCTGTTATGGAGGATCGTCTTAGAATCATCACCCAGGAACACATTGGCTGCAGCTTTGGTACTTGGTGA 2715 0.4247 MSISDYSAVDYVHQRGGGGNGTITTDHYRLSSKRKLDDYGPSSDDEDEEYQDFSELVSVRMRKDEPKAVNCFSGVNPRTINNSVADVHVRVSDAQSTSYACSSQSELTRSSSRLQFFVRMMSKGNTMVLQACPQDTVKSIHERIQIMKGIPLFEQRLIYRGKQLQWEQSLAECDIQNDANLQLVGRMRSTEHPLAWQVINDMVSLIFRLCRGEVEHDALKTIKGLITSYLNMTTRLDNDSASGYFQIFLSSSAPEVLIMLYMSTYRGNKDCADYSIRHFLSSCGSALCKSFHSQCARVVLEFCKLLRRVGSEDPLYLSCRTTFGSLLETAGVSYGSESGKGLILIQEISPFVRELANRLLKDLDFSMESPCSVEPLFSDVSDFIAFILPLRTGIKEQQVCNGSSLPDGKRHKHLIPAEEIEYLHLIFIELLKKMDHCLQKMEESLAAKERGEDDMLYSAWSHYLSILKELYHISKLYEGAEEEFWSVLRRQRSMLCVLIIRYARRTDDHQWILEQKSVTNFESRKHLAMMIFPEVKEDYEELHEMLIDRSHLLAESFEYIARAEPESLHAGLFMEFKNEEATGPGVLREWFFLVCQAIFNPQNALFVACPNDRRRFFPNPASKVDPLHLEYFSFSGRVIALALMHRVQVGIVFDRVFFSQLAGNYITLEDIRDADPCLYSSCKKILEMDADFIDSDALGLTFVREVEELGHRKVVELCPGGKSLLVNSKNREKYVDLLIQDHFVTSVSEQVSHFSQGFADILSNSRLQQFFFKSLELEDLDWMLHGSENIISVEDWKAHTEYNGYQVTDIQISWFWEIVGRMSAEQRKILLFFWTSVKYLPVEGFRGLASRLYIYKSSEPEDRLPSSHTCFYRICFPTYSSMAVMEDRLRIITQEHIGCSFGTW 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g01164 904 Gene3D Hect, E3 ligase catalytic domains 546 777 - -
Bach7g01164 904 FunFam E3 ubiquitin-protein ligase UPL5 isoform A 664 746 - -
Bach7g01164 904 ProSiteProfiles HECT domain profile. 564 904 IPR000569 GO:0004842
Bach7g01164 904 SMART hect_3 562 902 IPR000569 GO:0004842
Bach7g01164 904 SUPERFAMILY Hect, E3 ligase catalytic domain 540 891 IPR035983 GO:0004842
Bach7g01164 904 Pfam Ubiquitin family 117 188 IPR000626 GO:0005515
Bach7g01164 904 PANTHER HECT DOMAIN UBIQUITIN-PROTEIN LIGASE 115 902 - -
Bach7g01164 904 CDD HECTc 543 902 IPR000569 GO:0004842
Bach7g01164 904 Gene3D Hect, E3 ligase catalytic domain 664 746 - -
Bach7g01164 904 Gene3D Hect, E3 ligase catalytic domain 787 903 - -
Bach7g01164 904 FunFam E3 ubiquitin-protein ligase UPL5 isoform A 107 202 - -
Bach7g01164 904 FunFam E3 ubiquitin-protein ligase UPL5 788 903 - -
Bach7g01164 904 SMART ubq_7 114 186 IPR000626 GO:0005515
Bach7g01164 904 SUPERFAMILY Ubiquitin-like 115 202 IPR029071 -
Bach7g01164 904 Gene3D - 107 197 - -
Bach7g01164 904 Pfam HECT-domain (ubiquitin-transferase) 593 896 IPR000569 GO:0004842
Bach7g01164 904 MobiDBLite consensus disorder prediction 14 49 - -
Bach7g01164 904 PRINTS Ubiquitin signature 146 166 IPR019956 -
Bach7g01164 904 PRINTS Ubiquitin signature 167 188 IPR019956 -
Bach7g01164 904 PRINTS Ubiquitin signature 125 145 IPR019956 -
Bach7g01164 904 ProSiteProfiles Ubiquitin domain profile. 114 190 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g01164 Bach-Chr7 22307499 22311816 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g01164 114 188 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 40.000 1.63e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g01164 - - gmx:100789233 1359.74