Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g01156 ATGGGAATGGACCCTGGCAAGCTTTTCATTGGTGGGATTTCCTGGGACACAAATGAAGACCGACTCAGACAGTATTTTCAGAATTTTGGAGATGTGGTTGAGGCTGTGATAATGAAGGACCGCACCACAGGGCGTGCCCGTGGTTTTGGATTTGTTGTTTTTTCTGATCCTTCCGTTGCTGAACGAGTTGTTATGGAAAAACATGTCATTGATGGTAGAAGTGTTGAAGCAAAAAAAGCTGTTCCCAGAGATGATCAGAACATTCTGAACAGAAGCAATGGCAGCAGCAGTCATGGGTCGCCTGGACCTAGCCGCACAAAGAAGATATTTGTCGGAGGCCTAGCATCCACAGTCACTGAGAGCGACTTCAAGAAGTATTTTGAGCAATTTGGAGCAATCACAGATGTTGTTGTGATGTATGATCATAACACCCAAAGGCCAAGAGGTTTTGGATTCATTACCTATGATTCTGAGGATGCAGTTGACAAAGTTCTGTACAAAACTTTTCATGAACTGAATGGTAAAATGGTTGAGGTAAAGCGGGCAGTTCCAAAGGAATTATCTCCAGGTTCTAGTAGAGGCCAGTTGGCTGGATATAATTATGGTCTAAATAGAGTAAATAGCTTTTCTAATGGTTCCGTTCAGGGATATAATCCAAGCCTGGTTGGTGGGCTTGGACTTAGGACAGATGGCAGATTTAGTCCTATTACTGTCGGTCGGAGTGGATATCCTCCTTTTAGTCCTAGTTATGGGGCAGGGATCAATTATGAACCTACATTGAGTCAAAATGGGAATGCAAATTTCACTTCTACTCTCCCCTTAGGGCGGGCAATGAACCCTACTTATACTGGAAGTTCAAGCAAGTATGTTAATGCCATTGGATATGCTGGTACAAGTAGAGGCAACAGTTCAACCATAAGTTCTCCAAGTCAGAATTTTTGGGGCAATGGGAGTCTTAACTATGTTCCTAACTCTGCAAGCTCTGATTCTTTTGTAGGGTATGGAAGTGAAAATTCAAATATGGGTTCTTTTGGTAGTATTGGAGCACTTTGGAGATCCTCCCCTAGCATGGATCAAGCTGGATCAATTGGCTCCGGCTATGGTAAGGGCAGTCGTAGTTATGGCAATGGTGATCTGATCTTTGGTTCAAAAGCTGTAGGTTATGGAAAAAGTAGTGAAAACCTTCTTGCATCATCTTCATCATATGGTCTATCAAATGGCAATTATGATGGGGCATATAAAGATATCTATGAAGCTGGATCATTTTATGACCAAACTTGGCAATCACCGCCTTCAGAACTAGAGGATTCTGGTTCCCTTGGTTATGGCTCTGGAAATGCTGTTTCAGATTTGATGAGTAAAAATTCTGGTAGCCACATCGGGGCTTATACTGTTGCAAATAGACAAGCAAATAGAGGAATTGCTGCCTAG 1431 0.4256 MGMDPGKLFIGGISWDTNEDRLRQYFQNFGDVVEAVIMKDRTTGRARGFGFVVFSDPSVAERVVMEKHVIDGRSVEAKKAVPRDDQNILNRSNGSSSHGSPGPSRTKKIFVGGLASTVTESDFKKYFEQFGAITDVVVMYDHNTQRPRGFGFITYDSEDAVDKVLYKTFHELNGKMVEVKRAVPKELSPGSSRGQLAGYNYGLNRVNSFSNGSVQGYNPSLVGGLGLRTDGRFSPITVGRSGYPPFSPSYGAGINYEPTLSQNGNANFTSTLPLGRAMNPTYTGSSSKYVNAIGYAGTSRGNSSTISSPSQNFWGNGSLNYVPNSASSDSFVGYGSENSNMGSFGSIGALWRSSPSMDQAGSIGSGYGKGSRSYGNGDLIFGSKAVGYGKSSENLLASSSSYGLSNGNYDGAYKDIYEAGSFYDQTWQSPPSELEDSGSLGYGSGNAVSDLMSKNSGSHIGAYTVANRQANRGIAA 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g01156 476 CDD RRM1_hnRNPA_hnRNPD_like 8 78 - -
Bach7g01156 476 MobiDBLite consensus disorder prediction 82 106 - -
Bach7g01156 476 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 6 82 IPR000504 GO:0003723
Bach7g01156 476 PANTHER RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6 3 472 - -
Bach7g01156 476 MobiDBLite consensus disorder prediction 86 103 - -
Bach7g01156 476 SUPERFAMILY RNA-binding domain, RBD 4 104 IPR035979 GO:0003676
Bach7g01156 476 CDD RRM2_Hrp1p 108 185 - -
Bach7g01156 476 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 109 167 IPR000504 GO:0003723
Bach7g01156 476 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8 65 IPR000504 GO:0003723
Bach7g01156 476 Gene3D - 104 194 IPR012677 -
Bach7g01156 476 SMART rrm1_1 7 78 IPR000504 GO:0003723
Bach7g01156 476 SMART rrm1_1 108 180 IPR000504 GO:0003723
Bach7g01156 476 FunFam Heterogeneous nuclear ribonucleoprotein 1 104 191 - -
Bach7g01156 476 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 107 184 IPR000504 GO:0003723
Bach7g01156 476 SUPERFAMILY RNA-binding domain, RBD 103 204 IPR035979 GO:0003676
Bach7g01156 476 FunFam Heterogeneous nuclear ribonucleoprotein 1 5 87 - -
Bach7g01156 476 Gene3D - 5 88 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g01156 Bach-Chr7 22247217 22250269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g01156 8 219 Eukaryotic Initiation Factors Gene Family AT2G36660 29.864 4.87e-17 82.0