LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach7g01088	ATGGGCATGGAGGATGAAATTTCTCCGGCCGATGCTCGTGCGGCTCCCGGTAAGGAGCAACAAGCTGCCGGCGTTGGGATCCTTCTTCAGATCATGATGTTGGTTTTGTCCTTCGTCCTTGGTCATGTCCTTCGTCGCAAGAAAGTTTATGTTATTCCCGAAGCTAGTGCTTCTCTTCTTATAGGATTGATTGTTGGTGGACTAGCTAACATTTCAAACACACAAACTAGTATAAGGACGTGGTTCAATTTTCATGAGGAATTTTTCTTTCTGTTCCTGTTACCTCCTATCATATTTCAGTCTGGATTCAGCCTCTCACCCAAACCTTTCTTCTCAAATTTTGGAGCAATTGTGACATTTGCTATATTTGGTACCTTCATAGCTTCAATTGTAACGGGGGTTTTAGTCTACCTTGGTGGATTGATCTTCCTCATGTATAGACTACCTTTAGTTGAGTGCCTAATGTTTGGTGCTCTTATATCAGCAACTGATCCTGTTACTGTTTTATCCATATTCCAGGAACTTGGCACGGATGTTAACCTATATGCCTTGGTATTTGGGGAATCTGTCCTGAATGATGCAATGGCAATTTCCTTGTACAGGACAATGTCATTGGTTAGAAGTGACCCATCTGGACAGAATTTCTTGATGGTGGTTGTTAGATTTTTGGAGACTTTTGTTGGCTCAATGTCTGCAGGTGTTGGAGTCGGATTTATATCTGCTTTGCTATTCAAGTATGCAGGGTTAGATGTTGACAATCTTCAGAACTTGGAGAGCTGTCTTTTTGTTCTTTTCCCTTATTTCTCGTACATGCTTGCAGAAGGTCTTGGACTCTCTGGTATTGTCTCAATACTGTTCACGGGAATGGTCATGAAGCATTACACATACTCGAATTTGTCAGTGAGTTCTCAAAGATTTGTTTCTGCATTTTTTCACCTGATATCATCATTGGCAGAGACATTTGTGTTCATATACATGGGCTTTGATATTGCTATGGAACAACATAGCTGGACACATGTTGGATTTATTTTCTTCTCTATTATATTTATTGGGATTGCAAGGGCAGCAAATGTCTTTTCTTGTGCTTATCTGGTTAATATGGTTAGACCTTCATATCGAAAGATACCTCCAAAACATCAGAAAGCACTTTGGTATAGTGGACTTCGAGGGGCAATGGCCTTTGCCCTTGCTCTGCAATCAGTTCATGATCTTCCAGAAGGACATGGGCAGACCATATTCACTGCAACTACTGCTATAGTTGTTTTGACGGTACTACTGATTGGTGGTTCAACAGGTACCATGCTTGAAGCTCTAGAAGTTGTGGGTGATACTCTTGACATTGATAGCAGTTTAGGTTCTGTTCCTATAGGTTCAGTGAGCACCAGCACAAGTTTTGAAGGAAACAATGGCTATGTTGCTCCTTCGTATGATGATGAATCATCATCGGGGAACAAAATCAAGATGAAGCTGAAAGAATTTCACAAGAGTGCTGCATCTTTTACAGCATTAGATAAAAACTACCTCACTCCATTCTTTACCATTCAAAATGGAGATGAAGATGAAGATGATCAAGCTGAGCTTCTGAGTACCTCAAGAGGGAGTTTCTAGGGCTATGTGCATAGCCATTATTCATTGTGATCCTAGTCAAAGAACATGTTCGATAGGATATGAAGTATACTTTTGTACATTGTCTGGAACTAAGCAATTTATAGACAGCTTGGAAGAACTAGCAAAAACAAGAGTCAGATATGCCTCCTCTTTCCGGAGTTGTGCTATTGAGAATTTTCGTTCAAGTAGGCATTATGGCCCGTGAGGTTGGGGTAGGAAGAAATCTCCGCAGCCAGCTTGATTGCGTATCACGTTCAAGTTGGTGACTGTGCCTCTCCCACGAAGTTGGAGGTTTACAATCTGGTTC	1915	0.4125	MGMEDEISPADARAAPGKEQQAAGVGILLQIMMLVLSFVLGHVLRRKKVYVIPEASASLLIGLIVGGLANISNTQTSIRTWFNFHEEFFFLFLLPPIIFQSGFSLSPKPFFSNFGAIVTFAIFGTFIASIVTGVLVYLGGLIFLMYRLPLVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSLVRSDPSGQNFLMVVVRFLETFVGSMSAGVGVGFISALLFKYAGLDVDNLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGMVMKHYTYSNLSVSSQRFVSAFFHLISSLAETFVFIYMGFDIAMEQHSWTHVGFIFFSIIFIGIARAANVFSCAYLVNMVRPSYRKIPPKHQKALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAIVVLTVLLIGGSTGTMLEALEVVGDTLDIDSSLGSVPIGSVSTSTSFEGNNGYVAPSYDDESSSGNKIKMKLKEFHKSAASFTALDKNYLTPFFTIQNGDEDEDDQAELLSTSRGSF	535

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach7g01088	535	Pfam	Sodium/hydrogen exchanger family	33	436	IPR006153	GO:0006812\|GO:0015297\|GO:0016020\|GO:0055085\|GO:1902600
	Bach7g01088	535	Gene3D	-	150	201	-	-
	Bach7g01088	535	PRINTS	Na+/H+ exchanger signature	102	116	IPR004709	GO:0006814\|GO:0006885\|GO:0015385\|GO:0016020\|GO:0055085
	Bach7g01088	535	PRINTS	Na+/H+ exchanger signature	157	167	IPR004709	GO:0006814\|GO:0006885\|GO:0015385\|GO:0016020\|GO:0055085
	Bach7g01088	535	PRINTS	Na+/H+ exchanger signature	117	125	IPR004709	GO:0006814\|GO:0006885\|GO:0015385\|GO:0016020\|GO:0055085
	Bach7g01088	535	PRINTS	Na+/H+ exchanger signature	88	99	IPR004709	GO:0006814\|GO:0006885\|GO:0015385\|GO:0016020\|GO:0055085
	Bach7g01088	535	PANTHER	SODIUM/HYDROGEN EXCHANGER	9	526	IPR018422	GO:0006812\|GO:0015385\|GO:0016020\|GO:1902600
	Bach7g01088	535	NCBIfam	sodium/hydrogen exchanger 3	31	443	IPR004709	GO:0006814\|GO:0006885\|GO:0015385\|GO:0016020\|GO:0055085

Showing 1 to 8 of 8 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach7g01088	Bach-Chr7	21793603	21800043	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach7g01088	31	526	Antiporters	AT5G55470	30.566	3.67e-50	178

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach7g01088	K14724		-	gmx:100790830	864.759

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