LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach7g01039	ATGGATTCAAGTCTTATTGAGGAAAATGATATTCAATCAGAGTCGATGAGTCTAGATGACATCAAGCACGGCAGCTTAGAATTGAACGAACGGACAACACGACTTGAACTGAAGAATGGGAAGCTCTCTGAGTTACCACCGTCTATAAATTTCTCTCTGCTTAGAGTGCTGTCGTTGCAAGGCATTGCTGATTTGATGGAAATTCCGTCTTCACTTTTCGACCACTTGCCTTTGCTTCACACCTTGGACCTATCATACACAAGCATAACAGGTTTGCCAGGCTCCCTTTTCGGTTTAATGGAGCTTAGAGTACTGTATTTAAGAGGTTGTGAGCTTTTCATGGAACTACCACTAGAAATTGGTCAACTCAAGAAGCTTGAGGAGCTTGATCTTAAAGGAACTCAAATTACACATATGCCAACAGAGATCCAACAGTTGATCAATTTGCAACACTTGAGCCTCTCTTTTTATGAATATGACCAAAATATTAGTCGAGTCATTCCAAAAGGAGTGATATCAAAACTAACTCGATTAAGTTATCTAAGCATTGATGTGAACCCTGATCACAACAGGTGGGATGAGAATGTGAGAGTCATTTTACAAGAAATTTCTAAATTACGTTTTTTGAGAACTTTGATTCTGTATGTCCCACGAGTTGAGCTTTTGAGGCATACACCAGAAAAGAGGGACTTGGATGTTAGATTGGTTGTTGGTCATCATAGGCAGCGGATAATATCACGTGTACCACCCATGGTTGAAGAAAATTTTAAACAAAGCAATTGCAGCTTAAGATTTGTATATGGTGTGAATGTCCCACAAGAAATTACTAGGGTTCTTAGACGGACCAACACTTTTTTCTTGGATCGACATATGACCATCAAGCATCTCTCTGAATTTGGATTGATGAATCTCGACCAGCTGCAAGTATGCATAATGGCAGAATGTAATGAGATGCAAACAGTTCTTGAGAAAGGGCACCTACCCTTCAATCCACTTCCATGTTTGCAAGTCTTGAGCTTATTCTACATGAAGAATTTAAGAGGCATTTGGGAAGGCGACAGTACTTATATTAATCTTTTTGGTCAACTTAAGTCCTTGACAATGCACACTTGTCCTAATTTAACAACCGTCTTCACTCTGGATTTCGTTCACAATCTTATCAACTTGGAGGAGCTTTTAGTTCAAGATTGTCCCAAAGTAACTACTTTAATAACTCATAAATCATCTGGATTTAGGGCAGAACATTTGCTCCCTAATATAAGAAAGATATCACTTCTCTACCTTCCTGAATTAGTAAGCATTTCTGATGGATTGCAAATTGGACCAAAGTTAGAAAAAATAGGATTGTATTATTGTCCAAAACTCCAAAATATTTTTATTAGAGAATTGTGCAGCAAAGGACTGAAGGTTATCAAAGGAGAAACCAAGTGGTGGAAAGCGCTAAGATGGAATGATCCAATGAGGGGGCAAAGATGGAATGACCCAACGAGGGGGCTAAGATGGAATGATCCCCGACAAAATCTGAATGACATATTTTCTCCTATTGATGAAGAAGTTGACATAATGACTCAATTTGTTATGGACGTGGATGAATATTCTATCTCCAAGAATATAGAGATGGCACCCTTTGGAATGACACACCAGCAGGTCACAATTAAGAAATCCCTTGATTATCCTCACTCCGAACAAAGATTACAGTCCTCTTCACTGAATGTCGATGAGCCTGCTGTAGATGACTACATTTGGCGCAAGTATGGGCAGAAACAGTTTATAGATCGTAAACTTTCTCGTAGTTATTACAGGTGCACACATCCAAACTGTCGTGCCAAGAAAAAGGTTGAAGGCTCGCTTGATGGCCATATAACTGAAATTATTTACGAAGGTCAGCACAATCATCAGCCTCCTCAGTCCAACAAGCACACAAAAGATACTTTAGCTTCAAATGATGAGCCTGACCCCAAAAGGAGAAACACTGAAGCCAGGGTCCCTGAACCAGCCTCATCGCCAGGAAAAAGTCAAAGGCAATCGTTATCCAAGGAGATACTATAA	2049	0.3963	MDSSLIEENDIQSESMSLDDIKHGSLELNERTTRLELKNGKLSELPPSINFSLLRVLSLQGIADLMEIPSSLFDHLPLLHTLDLSYTSITGLPGSLFGLMELRVLYLRGCELFMELPLEIGQLKKLEELDLKGTQITHMPTEIQQLINLQHLSLSFYEYDQNISRVIPKGVISKLTRLSYLSIDVNPDHNRWDENVRVILQEISKLRFLRTLILYVPRVELLRHTPEKRDLDVRLVVGHHRQRIISRVPPMVEENFKQSNCSLRFVYGVNVPQEITRVLRRTNTFFLDRHMTIKHLSEFGLMNLDQLQVCIMAECNEMQTVLEKGHLPFNPLPCLQVLSLFYMKNLRGIWEGDSTYINLFGQLKSLTMHTCPNLTTVFTLDFVHNLINLEELLVQDCPKVTTLITHKSSGFRAEHLLPNIRKISLLYLPELVSISDGLQIGPKLEKIGLYYCPKLQNIFIRELCSKGLKVIKGETKWWKALRWNDPMRGQRWNDPTRGLRWNDPRQNLNDIFSPIDEEVDIMTQFVMDVDEYSISKNIEMAPFGMTHQQVTIKKSLDYPHSEQRLQSSSLNVDEPAVDDYIWRKYGQKQFIDRKLSRSYYRCTHPNCRAKKKVEGSLDGHITEIIYEGQHNHQPPQSNKHTKDTLASNDEPDPKRRNTEARVPEPASSPGKSQRQSLSKEIL	682

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach7g01039	682	Pfam	Leucine rich repeat	54	112	IPR001611	GO:0005515
	Bach7g01039	682	MobiDBLite	consensus disorder prediction	643	661	-	-
	Bach7g01039	682	Gene3D	WRKY domain	562	636	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bach7g01039	682	SMART	LRR_typ_2	123	146	IPR003591	-
	Bach7g01039	682	SMART	LRR_typ_2	76	99	IPR003591	-
	Bach7g01039	682	SMART	WRKY_cls	576	634	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bach7g01039	682	MobiDBLite	consensus disorder prediction	628	682	-	-
	Bach7g01039	682	SUPERFAMILY	WRKY DNA-binding domain	576	635	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bach7g01039	682	Gene3D	Ribonuclease Inhibitor	5	233	IPR032675	-
	Bach7g01039	682	Gene3D	Ribonuclease Inhibitor	247	469	IPR032675	-
	Bach7g01039	682	PANTHER	NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED	45	487	-	-
	Bach7g01039	682	Pfam	WRKY DNA -binding domain	578	633	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bach7g01039	682	FunFam	WRKY transcription factor	562	636	-	-
	Bach7g01039	682	ProSiteProfiles	WRKY domain profile.	578	635	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bach7g01039	682	MobiDBLite	consensus disorder prediction	668	682	-	-
	Bach7g01039	682	SUPERFAMILY	L domain-like	23	461	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach7g01039	Bach-Chr7	21414331	21417537	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach7g01039	566	668	WRKY Transcription Factor Family	AT2G03340	41.935	1.88e-26	112

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Bach7g01039		LRR_8	2.3e-08	CL0022

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach7g01039	-		-	aip:107622712	514.612