Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g01002 ATGTTGGTTTGGTACACTTCTTCAGATGCTGCAAACACATCTGGTAGTCCACGGGAGAGTCTTGTGAACCAAATGATGTATCTTGACATAAACTCTCAAATTGGGAGTAGCATGTCACTTTCTTCAATGCGAATTGGAACAATAATTCACAACATTGAGTTGAAGCCAGGGCAAGGTGGCAAGCTTGTCCGAGCAGCTGGAACAAGTGCACAGATCTTGAAAGATCCCAAAGCGAGATACTGTTTAGTTCAACTCCCTTCAGGTGTTAAAAAGATGATCGATTCTTGTTGCAGGGCCACAGTAGGCACAGTGTCTAATCCAAGCCATAAAGATAAGAAGCTCAGGAAGGCCGGGCAAAGTCAACAGTTCGAGGAGTGGTCATGA 384 0.4453 MLVWYTSSDAANTSGSPRESLVNQMMYLDINSQIGSSMSLSSMRIGTIIHNIELKPGQGGKLVRAAGTSAQILKDPKARYCLVQLPSGVKKMIDSCCRATVGTVSNPSHKDKKLRKAGQSQQFEEWS 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g01002 127 SUPERFAMILY Translation proteins SH3-like domain 34 123 IPR008991 -
Bach7g01002 127 Gene3D - 23 104 IPR014722 -
Bach7g01002 127 MobiDBLite consensus disorder prediction 104 127 - -
Bach7g01002 127 PANTHER RIBOSOMAL PROTEIN L2 16 122 IPR002171 GO:0003735|GO:0005840|GO:0006412
Bach7g01002 127 SMART Ribosomal_L2_C_2 32 127 IPR022669 GO:0003735|GO:0005840|GO:0006412
Bach7g01002 127 FunFam 60S ribosomal protein L2, mitochondrial 28 104 - -
Bach7g01002 127 Pfam Ribosomal Proteins L2, C-terminal domain 34 126 IPR022669 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g01002 Bach-Chr7 21161196 21161579 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g01002 31 122 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 37.634 2.77e-13 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g01002 - - qsa:O6P43_031498 152.14