LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach7g00992	CTCCCTCTCTCTTCCCCACACGGCGTTAAAGTTGGATTCTTCTCCTATTATATTATTTCATGGATTCTAAAATACTAATCTCAATGATTTAGCTGTGGATTTTGTTCACGATACTTTGCTTCCCTTTGAAACTCTCCTACATCCCACCATCACACTCCTAAAAGACACTCACCCTCTTCAGCGGACGGTGTCTTGATATCGAATTCCATTCCAAAATTCCTTCTTTGGAAATCTGACATATTTGTTCTTCTTTTGCTCTTTTCTGTTCGTATTTTGGTGTTTGGGGATCAAAATTTTTGTTAACTTTCCTGGGTTTGTTTGATCTGGGCTGGTGGGCATGAACTGAAGCTGGATTGTTCTCGATTTGAAGCTGTAAAGTTTACACGGTGTTCATTTCGAAGTAAGAAGGGAGAAGAGGATGGAGAAGTACGAGCTGGTGAAGGACATAGGATCTGGTAATTTCGGGGTGGCCAGGCTTATGCGCAACAAGGAAACCAAGGAGCTCGTTGCCATGAAATACATTGAACGGGGCCACAAGATTGATGCGAATGTAGCAAGGGAAATCATAAACCATAGATCTCTACGCCATCCTAATATAATTCGTTTCAAAGAGTTGGTTTTGACTCCTACACATCTTGCAATAGTTATGGAGTATGCAGCAGGTGGAGAGCTTTTTGAGAGAATCTGCAATGCTGGAAGATTCAGCGAAGATGAGGCCAGGTATTTCTTCCAGCAGCTCATCTCAGGAGTTAATTACTGTCATGCCATGCAAATCTGCCACCGTGACTTGAAACTGGAGAACACCTTATTGGATGGGAGCCCTGCCCCTCGCCTGAAAATTTGTGATTTTGGTTATTCTAAGTCATCTCTGCTTCATTCAAGGCCTAAATCAACAGTGGGAACTCCAGCCTACATTGCACCAGAGGTTCTTTCTCGTAGGGAATATGATGGAAAGTTGGCAGATGTATGGTCTTGTGGAGTGACTCTTTATGTAATGCTGGTTGGAGCATACCCATTTGAGGACCAAGAAGATCCCAGAAACTTCAGGAAAACCATAAATCGAATTATGGCTGTTCAATACAAGATTCCAGACTACGTTCACATATCTCAAGACTGTAGACATCTCCTGTCTCGTATTTTTGTGGCAAATCCAATAAGGAGGATCACTATTAAAGAAATCAAGTCCCACCCATGGTTTTTGAAGAACTTGCCTAGGGAATTGACAGAAACAGCTCAAACTGTTTACTACAGAAAAGAGAACCCTACCTTTTCTCTCCAAAGTGTGGAAGATATCATGAAAATTGTTGAAGAGGCCAAAGCTCCACCTCCTGTTTCCAGGTCGATTGGAGGGTTTGGCTGGGGATGTGAGGAGGAAGAAGAAGTAGAAGTAGAAGAAGAAGAAGAAACAAAAGAAGATGCATCTGCTGACGGGGAGGAAGATGAGTATGATAAGAGAGTCAAGGAGGCACGGGCTAGCGGAGAAATTCCCGTTAGTTAAAACGTGTTCCAAGTTCTTGTATAGTTC	1525	0.4262	MEKYELVKDIGSGNFGVARLMRNKETKELVAMKYIERGHKIDANVAREIINHRSLRHPNIIRFKELVLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVNYCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPRNFRKTINRIMAVQYKIPDYVHISQDCRHLLSRIFVANPIRRITIKEIKSHPWFLKNLPRELTETAQTVYYRKENPTFSLQSVEDIMKIVEEAKAPPPVSRSIGGFGWGCEEEEEVEVEEEEETKEDASADGEEDEYDKRVKEARASGEIPVS	359

Showing 1 to 1 of 1 entries

Previous1Next

Annotation information

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Bach7g00992	359	Coils	Coil	317	337	-	-
Bach7g00992	359	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	119	131	IPR008271	GO:0004672\|GO:0006468
Bach7g00992	359	SUPERFAMILY	Protein kinase-like (PK-like)	2	294	IPR011009	-
Bach7g00992	359	Pfam	Protein kinase domain	4	260	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Bach7g00992	359	PANTHER	SERINE/THREONINE KINASE	2	307	-	-
Bach7g00992	359	ProSitePatterns	Protein kinases ATP-binding region signature.	10	33	IPR017441	GO:0005524
Bach7g00992	359	CDD	STKc_SnRK2	3	259	-	-
Bach7g00992	359	FunFam	Serine/threonine-protein kinase SRK2A	80	268	-	-
Bach7g00992	359	FunFam	Serine/threonine-protein kinase SRK2E	1	79	-	-
Bach7g00992	359	Gene3D	Transferase(Phosphotransferase) domain 1	80	268	-	-

Showing 1 to 10 of 15 entries

Previous1 2Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach7g00992	Bach-Chr7	21109326	21112360	Dispersed/Wgd

Showing 1 to 1 of 1 entries

Previous1Next

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach7g00992	3	263	CBL-interacting serine-threonine protein kinases	AT2G26980	42.279	1.47e-67	217

Showing 1 to 1 of 1 entries

Previous1Next

Transcription factors information

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_OST1L	Bach7g00992		Pkinase	4.2e-71	CL0016

Showing 1 to 1 of 1 entries

Previous1Next

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach7g00992	K14498		-	gmx:100809324	651.358

Showing 1 to 1 of 1 entries

Previous1Next