LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach7g00965	ATGTTTAAAAGGTCAAAAGGTTTATTCCCTCCATTCTCGTGTGCGGAGGAAGAAGAAAAGGCAGCCGCTACTTTCTACACTTGCCTTACTCTTCGTCTTTCCGCATCTGAGCCTGGTTCTGTAAGGATGGTTAGAGTCAGTGTCTTGAATGATGCATTAAAGAGCATGTACAATGCTGAAAAGCGGGGAAAGCGGCAAGCAATGATTAGACCTTCATCAAAGGTCATCATCAAGTTTCTTCTGGTTATGCAGAAGCATGGATACATTGGTGAGTTTGAGTTTGTTGACGATCATAGGGCTGGAAAAATTGTTGTTGAACTGAATGGAAGGCTGAACAAGTGTGGTGTTATCAGCCCTCGTTTTGATGTTGGTGTCAAAGAAATTGAATCATGGACTGCTAGATTGCTTCCTTCCAGACAGTTTGGATATATTGTTCTTACAACTTCCGCCGGAATCATGGACCATGAAGAAGCTCGGAGGAAAAATGTTGGTGGGAAAGTTCTTGGCTTCTTTTATTAGGAAGGAA	526	0.424	MFKRSKGLFPPFSCAEEEEKAAATFYTCLTLRLSASEPGSVRMVRVSVLNDALKSMYNAEKRGKRQAMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIESWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY	172

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach7g00965	172	Pfam	Ribosomal protein S8	49	172	IPR000630	GO:0003735\|GO:0005840\|GO:0006412
	Bach7g00965	172	SUPERFAMILY	Ribosomal protein S8	46	172	IPR035987	GO:0003735\|GO:0005840\|GO:0006412
	Bach7g00965	172	Gene3D	-	112	172	-	-
	Bach7g00965	172	Gene3D	-	43	111	-	-
	Bach7g00965	172	ProSitePatterns	Ribosomal protein S8 signature.	142	159	IPR000630	GO:0003735\|GO:0005840\|GO:0006412
	Bach7g00965	172	FunFam	40S ribosomal protein S15a	43	111	-	-
	Bach7g00965	172	FunFam	40S ribosomal protein S15a	112	172	-	-
	Bach7g00965	172	Hamap	30S ribosomal protein S8 [rpsH].	44	172	IPR000630	GO:0003735\|GO:0005840\|GO:0006412
	Bach7g00965	172	PANTHER	40S RIBOSOMAL PROTEIN S15A	43	171	IPR000630	GO:0003735\|GO:0005840\|GO:0006412

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach7g00965	Bach-Chr7	20810644	20812418	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach7g00965	43	172	Cytoplasmic Ribosomal Protein Gene Family	AT5G59850	95.385	9.03e-92	261

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach7g00965	K02957		-	pop:7457926	259.225