Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g00941 ATGTCATTCCGAAGCATAGTCCGTGATGTGAGGGATAGTTTTGGGAGCTTATCTAGACGGAGTTTTGATGTTAGGTTGACTGGCCATCACAGAGGGAAATCTCATGGTTCACTAAATGATTTGCATGACCAACCTTTAGTAATTCAAAGTAGTCGCTGGGCTAGTCTGCCCCCAGAACTGCTATATGATGTCATCAGAAGGCTGGAGGAAAGTGAGAGTACATGGCCTGCTCGAAAGCATGTTGTTGCATGTGCTGCTGTTTGCCGCACTTGGAGACACATGTGCAAGGAAATTGTGAAGAGTCTAGAGTTATGTGGCAAGCTTACTTTCCCTGTCTCTCTGAAGCAGCCTGGAACACGTGATGGAATCATTCAATGTTTCATCAAAAGGGATAAATCTAATTTAACATACCATCTATATCTTTGTCTCAGCCCTGCTTTGTTGGTTGAAAATGGAAAATTCCTCCTTTCTGCCAAGAGGACGCGAAGAACAACTTATACAGAATATGTTATCTCTATGGACGCTGACAACATCTCTAGATCAAGTAGCACTTACATTGGAAAGCTGAGGTCAAACTTCCTTGGTACAAAATTCATAATATATGATACACAGCCTCCATGCACTTCTGCTCACATTTCCCCTCCTGGGAAGACTAGCAAAAGGTTTTATTCGAAGAAAGTTTCACCAAAGGTCCCATCTGGGAGTTACAACATAGCTCAGGTAACATATGAATTAAATGTGCTTGGAACTCGAGGTCCAAGGAGGATGCACTGCATCATGCATTCCATCCCAGCCTCAGCTCTTGATGCAGGCGGCAGTGTTCCAGGCCAACCAGAGCTTCTCCCTCGCTCCCTAGAGGACTCGTTCCGAAGCATCTCCTTTTCAAAGTCTCTGGATCACTCTTGCGAGTTCAGCAGTGCCCGATTTTCTGAAATTGGTGGATCTGTCAATGAGGATGAGGATGGGAAGGCAAGACCTTTGGTTCTGAAAAACAAGCCTCCGAGATGGCATGAACAATTACAATGCTGGTGCCTCAATTTCCGGGGACGGGTAACCGTTGCATCTGTTAAAAACTTCCAGCTGATTGCTGCCACGCAGCCAGCTGCCGGCGCACCAACCCCATCTCAGCCCGCGCCATCAGAGCATGATAAGATAATTCTGCAGTTTGGCAAAGTTGGGAAAGATATGTTCACCATGGACTATCGATACCCTTTATCTGCATTCCAGGCCTTTGCAATATGCCTTAGTAGCTTCGACACCAAATTGGCTTGTGAATAG 1278 0.457 MSFRSIVRDVRDSFGSLSRRSFDVRLTGHHRGKSHGSLNDLHDQPLVIQSSRWASLPPELLYDVIRRLEESESTWPARKHVVACAAVCRTWRHMCKEIVKSLELCGKLTFPVSLKQPGTRDGIIQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTYTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPCTSAHISPPGKTSKRFYSKKVSPKVPSGSYNIAQVTYELNVLGTRGPRRMHCIMHSIPASALDAGGSVPGQPELLPRSLEDSFRSISFSKSLDHSCEFSSARFSEIGGSVNEDEDGKARPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIAATQPAAGAPTPSQPAPSEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g00941 425 PRINTS Tubby superfamily signature 347 363 IPR000007 -
Bach7g00941 425 PRINTS Tubby superfamily signature 403 425 IPR000007 -
Bach7g00941 425 PRINTS Tubby superfamily signature 185 209 IPR000007 -
Bach7g00941 425 PRINTS Tubby superfamily signature 235 262 IPR000007 -
Bach7g00941 425 PRINTS Tubby superfamily signature 329 346 IPR000007 -
Bach7g00941 425 PRINTS Tubby superfamily signature 382 401 IPR000007 -
Bach7g00941 425 PRINTS Tubby superfamily signature 169 185 IPR000007 -
Bach7g00941 425 Pfam F-box domain 53 99 IPR001810 GO:0005515
Bach7g00941 425 ProSitePatterns Tub family signature 2. 410 425 IPR018066 -
Bach7g00941 425 FunFam Tubby-like F-box protein 110 425 - -
Bach7g00941 425 Pfam Tub family 114 420 IPR000007 -
Bach7g00941 425 PANTHER TUBBY-RELATED 37 423 - -
Bach7g00941 425 SUPERFAMILY Tubby C-terminal domain-like 103 425 IPR025659 -
Bach7g00941 425 CDD F-box_AtTLP-like 53 97 - -
Bach7g00941 425 SUPERFAMILY F-box domain 48 97 IPR036047 GO:0005515
Bach7g00941 425 ProSitePatterns Tub family signature 1. 347 360 IPR018066 -
Bach7g00941 425 FunFam Tubby-like F-box protein 48 101 - -
Bach7g00941 425 Gene3D - 48 102 - -
Bach7g00941 425 Gene3D Tubby Protein; Chain A 112 419 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g00941 Bach-Chr7 20639572 20642103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g00941 1 425 TUB Transcription Factor Family AT1G76900 71.460 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TUB Bach7g00941 Tub 1.1e-117 CL0395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g00941 K19600 - cave:132181352 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach7g00941 7 20639572 20642103 Bach7g00941 7 20639572 20642103 ECH