Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g00935 GTCGTTCTTCAACTCTACAGAAACCTGCGCCTTTCTGTGATTCGTCGCGTCACTGGTGCTGCTCCATCCCCTCTATTCTCGCTTTCTACCTTTACAGATTTTTTTTTTATTTTTTGATATTCCTTTCTCTCTCTCTTTTGGCCTTTGATATTCGTTGTTATCGAGCTTTTATGTTTCGGATTGAATCGGGTTGTTTCAAAAATTGAGAATTTTCTTAGAAACATCGACTAAATTCTCGAAACAGGTTTTATATGATGTTTCAAAACTATAAGGATCGTTGGGTTTGCTTGGGTTGGCTTTGCAAGTTAAGAATGTGATTGAGGTGCTGTTACTTTACTCTGATTTGTTTATTTAGTAGAGCAGTTATTCTCTTGTTGGTATATAGTGTGGCACTTGGCAAAATCCAGTAACTCGGCTTGTCTAAGAATTGAGGTTAAGCATTGATAAATGTTGCTGCTTTGGGCGAATAGGAACTCGGTTGCGGCTAGAGCAGAGTGTGATCACTAAAGAATTGCGTATGTTTCTTAATTGCCGCTGGACGATGGCATGCTTAGCCATGCCTGGAGTAGTTGGAACATTTTGTCTAATTTGTTTTATCTTTAATGTGGAACAGCAGTCGAGGGTAACTGTGCCAAATAGTGTAATTGATAGAAACGAATAGGTTAACCGAATATTTACGTTAATATGAAACTTCATGAGTTGTATGTTTGGTGTATGGTGGAATCAGGGAGCAGGGTAAGCTTTCTCTTGAATTGATTCTTTTTTCATTTGTGTAATGTTTACTGTCAATATATAAATGTACGTTGTCATAGATGTCTTTTCTAGTGACTATTTCCAACAAGGGCAACTATCCTGTACTATGTTTATATGATGCACATTTTCTGGCATCAGTTTCAAGGTAAGTGAACTCTCCAGCTATCTAACTGACTTTCATAATGAAGCACAAGTGGATGAAAACTAATTATGGTAATCATAAATATTCTGCTTGTTCGTACTTGATTTCCCACTTCATCTCAATTGAAGTTGATTAGACTTTTCATGTGGATTTAGTTTCTTCCGGTAGTTTATGTAGATTCTGTGATGGCTGACCCTTGATAACTTATCCAAACATTTTTTGGTAAATGATGGTTTGCCTCAAAAATAAATATGCAGTTTAAGATGTCAGACTTGGAAGAATATCGTTGCTTTATTGGTGGCCTTTCATGGTCAACATCTGATAGAAAGTTAAGAGATGCATTTGAGAAGTTTGGCAAGCTTGTTGAAGCAAAGGTGGTTGTTGACAAATTCTCTGGGCGTTCTCGTGGTTTTGGATTTGTCACTTTTGATGAAAAGAAAGCAATGGAAGATGCTATTGAGGCAATGAACGGGATGGATTTAGATGGTCGAACTATTATTGTTGATAAAGCTCAGCCTCAACAAGGATCAAGTAGAGATGATGATGAGCGCTACCAAGATCATGGTCGTGATCGTGATCGTGATCGTGATCGTGATCGTGATCGTAACCGAGATTATGGAGGTGGCCGAGGATCAAATGGTGGTGAATGCTTTAACTGTGGTAAACCTGGCCATTTTGCTCGGGAGTGTCCCAGTAAAGGGGGAAGAGGGAGCAGGTACAGTGGCAGGGAAAGTAGATATGGTGGTAGTCACTATGGTCCTGATAGGAATGCAGAACGTCCTTCTGGTGGACGCAATAGGGATTCTGGTGGTCATGGAGATCGTGACCGTGCTGGACCCTATGAGCGACGGGGATCGGGAGGCTTTCGTTCTGGATAG 1773 0.4005 MSDLEEYRCFIGGLSWSTSDRKLRDAFEKFGKLVEAKVVVDKFSGRSRGFGFVTFDEKKAMEDAIEAMNGMDLDGRTIIVDKAQPQQGSSRDDDERYQDHGRDRDRDRDRDRDRNRDYGGGRGSNGGECFNCGKPGHFARECPSKGGRGSRYSGRESRYGGSHYGPDRNAERPSGGRNRDSGGHGDRDRAGPYERRGSGGFRSG 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g00935 204 MobiDBLite consensus disorder prediction 87 119 - -
Bach7g00935 204 CDD RRM2_NsCP33_like 8 83 - -
Bach7g00935 204 FunFam Glycine-rich RNA-binding protein RZ1A 1 124 - -
Bach7g00935 204 SMART c2hcfinal6 128 144 IPR001878 GO:0003676|GO:0008270
Bach7g00935 204 MobiDBLite consensus disorder prediction 82 204 - -
Bach7g00935 204 SUPERFAMILY Retrovirus zinc finger-like domains 111 150 IPR036875 GO:0003676|GO:0008270
Bach7g00935 204 Gene3D - 2 95 IPR012677 -
Bach7g00935 204 SMART rrm1_1 8 81 IPR000504 GO:0003723
Bach7g00935 204 SUPERFAMILY RNA-binding domain, RBD 5 114 IPR035979 GO:0003676
Bach7g00935 204 MobiDBLite consensus disorder prediction 170 195 - -
Bach7g00935 204 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 85 IPR000504 GO:0003723
Bach7g00935 204 Gene3D - 120 181 - -
Bach7g00935 204 Pfam Zinc knuckle 128 144 IPR001878 GO:0003676|GO:0008270
Bach7g00935 204 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 10 78 IPR000504 GO:0003723
Bach7g00935 204 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 1 191 - -
Bach7g00935 204 ProSiteProfiles Zinc finger CCHC-type profile. 129 144 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g00935 Bach-Chr7 20536259 20538238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g00935 9 96 Eukaryotic Initiation Factors Gene Family AT1G22760 36.364 8.03e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g00935 - - gmx:100815224 295.049