Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g00880 ATGGAGAACGAAGACATTGAGATGCAGGGAGAAGAGACCAATGAAGCTGAATTGGACGACATGAAGAAGCGGTTGAAGGAAATGGAGGATGAAGCTGCTGCTTTGCGAGAGATGCAGGCCAAGGTCGAGAAGGAGATGGGATCTGTGCAAGATCCTGCTGCTGCTTCTGCAAGCCAGGCCAATAGAGAGGAAGTAGATTCTCGATCAATCTTCGTAGGCAATGTTGCATTCTGCTTTGACATAATGTTTAACTACAATCGCAGAGGAATTGATTATATTGGAGATCGAGAATCCAGACTCGGACTGGTGAGAAGAGGACATGCTTTAAAGTTTAAGGACTATCCATGGATGTCTGCTGTTTTGCTTGCAAAGCAAAAGGCTGCCTTTTGGTCGTGCTTAGTGCTCAAGAAATATGTAGATTATTCGTGCACTCCTGAAGAAGTGCAGCAGCATTTCCAATCGTGCGGAACAGTAAACAGAATTACCATTCGCACTGACAAGTTTGGTCAGCCCAAGGGTTATGCTTATGTGGAATTCGTTGAAGTAGAGGCTGTTCAAGAGGCTCTCCTTCTGAATGAATCTGAACTACATGGCCGCCAATTGAAGGTAACCCCAAAGCGGACCAATGTACCTGGAATGAAGCAGTATCGACCCCGCCGGTCCAATCCTTACATGGGGTTCCGAGGCAGAACCCCATTTGCTCCTCCTTTTGTTTATTCTCCATATGGATATGGAAAAGTTCCAAGGTTCAGAGCTCCAATGCGGTACAGCCCCTACTATTGA 783 0.4623 MENEDIEMQGEETNEAELDDMKKRLKEMEDEAAALREMQAKVEKEMGSVQDPAAASASQANREEVDSRSIFVGNVAFCFDIMFNYNRRGIDYIGDRESRLGLVRRGHALKFKDYPWMSAVLLAKQKAAFWSCLVLKKYVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFVEVEAVQEALLLNESELHGRQLKVTPKRTNVPGMKQYRPRRSNPYMGFRGRTPFAPPFVYSPYGYGKVPRFRAPMRYSPYY 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g00880 260 Gene3D - 62 212 IPR012677 -
Bach7g00880 260 SUPERFAMILY RNA-binding domain, RBD 139 230 IPR035979 GO:0003676
Bach7g00880 260 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 9 230 - -
Bach7g00880 260 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 139 202 IPR000504 GO:0003723
Bach7g00880 260 CDD RRM_II_PABPs 139 204 - -
Bach7g00880 260 SMART rrm1_1 132 204 IPR000504 GO:0003723
Bach7g00880 260 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 131 208 IPR000504 GO:0003723
Bach7g00880 260 Coils Coil 11 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g00880 Bach-Chr7 19971276 19974019 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g00880 137 205 Eukaryotic Initiation Factors Gene Family AT2G23350 31.429 6.91e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g00880 K14396 - mnt:21400190 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach11g00716 11 5471343 5475551 Bach7g00880 7 19971276 19974019 BWGD