LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach7g00871	GCAAAATGAAGTTCAACATTGCTAATCCCACCACTGGGTGCCAGAAGAAGCTGGAGATCGATGACGATCAAAAACTTCGAGCATTTTGGGATAAGCGGATTTCCCAGGAAGTTAGCGGTGATTCCTTGGGTGAGGAATTTAAAGGCTATGTCTTCAAGATCACCGGAGGGTGTGACAAACAAGGATTTCCAATGAAGCAGGGAGTGCTGACTCCTGGTCGTGTACGACTCTTGCTGCACAGAGGAACTCCATGCTTCCGTGGATATGGAAGGCGTAATGGAGAGCGCCGGAGGAAGTCTGTTCGTGGGTGCATTGTGAGTCCAGACCTCTCAGTTCTGAACTTGGTTATAGTGAAGAAGGGTGAAAGTGACTTACCAGGCCTGACAGACCTTGAAAAGCCAAGGATGAGAGGTCCAAAGAGAGCCTCCAAAATTCGTAAACTGTTCAACCTGTCAAAGGAGGATGATGTGCGGAAGTATGTCAACACTTACCGTCGAACCTTTACCACAAAAAATGGGAAAAAGGTGAGCAAGGCTCCGAAGATACAAAGATTGGTCACTCCATTGACTCTCCAAAGAAAGCGTGCAAGGATTGCAGAAAAGAAAAAGAGAATTGCTAAGGCTAAGTCAGAGGCTGCTGAATACCAGAAACTTCTGGCATCTAGATTGAAGGAGCAGAGGGAACGCCGCAGCGAGAGTTTGGCCAAGCGGAGATCCAAGCTTTCCAGTGCTTCTAAGCCCTCTGTTGCTGCATAA	755	0.4768	MKFNIANPTTGCQKKLEIDDDQKLRAFWDKRISQEVSGDSLGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGESDLPGLTDLEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKNGKKVSKAPKIQRLVTPLTLQRKRARIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSSASKPSVAA	249

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach7g00871	249	Coils	Coil	189	216	-	-
	Bach7g00871	249	MobiDBLite	consensus disorder prediction	222	237	-	-
	Bach7g00871	249	PANTHER	40S RIBOSOMAL PROTEIN S6	1	240	IPR001377	GO:0003735\|GO:0005840\|GO:0006412
	Bach7g00871	249	PIRSF	RPS6e	1	249	IPR014401	GO:0003735\|GO:0005840\|GO:0006412
	Bach7g00871	249	Gene3D	-	133	234	-	-
	Bach7g00871	249	SMART	Ribosomal_S6e_2	1	128	IPR001377	GO:0003735\|GO:0005840\|GO:0006412
	Bach7g00871	249	MobiDBLite	consensus disorder prediction	222	249	-	-
	Bach7g00871	249	Pfam	Ribosomal protein S6e	1	128	IPR001377	GO:0003735\|GO:0005840\|GO:0006412
	Bach7g00871	249	ProSitePatterns	Ribosomal protein S6e signature.	52	63	IPR018282	GO:0003735\|GO:0005840\|GO:0006412

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach7g00871	Bach-Chr7	19880760	19883100	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach7g00871	1	249	Cytoplasmic Ribosomal Protein Gene Family	AT5G10360	71.486	4.09e-120	338

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach7g00871	K02991		-	oeu:111409065	405.216