Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g00863 ATGCCTTCTCCCTTTCCTGCATACCCAAATCCCTTATCCGATATGGGACGTACCAGAAGGTTGGCCGCATTAGAAGATTGCATAAAAACCTGTTACTCGAGGAATTGTCCCCCTACTTGCTTTACTACCTGCAACCATAATTGCACAATTTCTTGTCCTCCGGGTCCTCTTATCAACGTAGATGAAGATTGCATAGACGAATGTTACTCGAGCAATTGTCCCCCTACTTGCACTCATGCCTGCAAATTTAATTGCACAATTTCTTGCCCTCCGGATCCTCCTCCTATCGGCAAAGGCCACCATAAAATTCCCGTTGTTTTAATCATCACCCTTGCTCTTCTCGCTGCTACTTTCTTTGTTGTCTGCTGCTATGCCCTCTATGCCAAGTTCCGGTTAAGTCGAAGGAGGAGATCACAGCCACTAACAGAAGAAACCCAAGATGATTTTCTTGACGAAGAACATGGCCCTGTGGTGGACCATCCCATATGGTATATCCGCACCACTGGTCTTCAAGAGTCAATTATCAGTGCCATCACGGTTTGTAAGTATAAGGGGGGTGAGGGTTTGATTGAAGGAACTGAGTGCTCTGTTTGCTTGAGTGAATTTGAAGAGGATGAGACTCTCAGGCTTTTGCCTAAGTGTAATCATGCTTTTCATCTCCCTTGTATTGATACTTGGCTTAGATCACACACCAATTGCCCTATGTGTCGTGCTCCTATAGTCACCAACACAGCAAGAACACCATCTGAGGAGCCTAATCTTGTTGATTCAAGATCTGTGGAAAATATCCAGATGGAGATTGTTATAGATAGTGGTGAAAACAGTGTGAGAATTGAAAATGGTGCTCCTGAATTGAGGATTGGAGAAGAGGAAGAAGCTCAACCGGAAAGTGAAGAAGACGGGAGAAGGGTGTGTGAAAGTGGAAGCTCAAGTGCTGAAGGGGAGAACTTGCAGCCAAGGAGAAGATCAGTTTCTTTGGATGATTCTTCTGCTGCAAAGGTCAGTCTTGCTCTTGCTTCTTTTGCTCTAGCAGGGGGATCTTCTGGGAATTCAAGTAGGCAACTGGGGCAAGTGAATGGAGCAATTGTGTCAAAGAAGGTTGCAAAGGGTAGTTCTTCTTTTAGAACAAGGTATCTGCAGAGTGCACCTACTTCAATGAAGAGATCACGTTCCTTCAATGGGAAACACTTGCTATCCTGGCATAACCGAAGTCAGAAGAAGCCAAATCCTCCTATTAGAAGCTTTTGA 1248 0.4479 MPSPFPAYPNPLSDMGRTRRLAALEDCIKTCYSRNCPPTCFTTCNHNCTISCPPGPLINVDEDCIDECYSSNCPPTCTHACKFNCTISCPPDPPPIGKGHHKIPVVLIITLALLAATFFVVCCYALYAKFRLSRRRRSQPLTEETQDDFLDEEHGPVVDHPIWYIRTTGLQESIISAITVCKYKGGEGLIEGTECSVCLSEFEEDETLRLLPKCNHAFHLPCIDTWLRSHTNCPMCRAPIVTNTARTPSEEPNLVDSRSVENIQMEIVIDSGENSVRIENGAPELRIGEEEEAQPESEEDGRRVCESGSSSAEGENLQPRRRSVSLDDSSAAKVSLALASFALAGGSSGNSSRQLGQVNGAIVSKKVAKGSSSFRTRYLQSAPTSMKRSRSFNGKHLLSWHNRSQKKPNPPIRSF 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g00863 415 SMART ring_2 195 236 IPR001841 -
Bach7g00863 415 MobiDBLite consensus disorder prediction 309 326 - -
Bach7g00863 415 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 170 245 IPR013083 -
Bach7g00863 415 SUPERFAMILY RING/U-box 189 246 - -
Bach7g00863 415 FunFam RING-H2 finger protein ATL54 170 243 - -
Bach7g00863 415 PANTHER RING-H2 FINGER PROTEIN ATL16 90 354 IPR044600 GO:0016567|GO:0016740
Bach7g00863 415 MobiDBLite consensus disorder prediction 288 326 - -
Bach7g00863 415 MobiDBLite consensus disorder prediction 366 415 - -
Bach7g00863 415 MobiDBLite consensus disorder prediction 369 415 - -
Bach7g00863 415 ProSiteProfiles Zinc finger RING-type profile. 195 237 IPR001841 -
Bach7g00863 415 CDD RING-H2_EL5-like 194 237 - -
Bach7g00863 415 Pfam Ring finger domain 194 237 IPR001841 -
Bach7g00863 415 SMART FANCL_C_2 191 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g00863 Bach-Chr7 19847272 19848519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g00863 103 248 C3H Transcription Factor Family AT1G72220 54.248 3.80e-46 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g00863 - - qsa:O6P43_031641 327.405