Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g00862 CTCAAAACCCTACACTCCATCGCCTCCACTTAAAACCCTAGTACCAGAAAACTCAGTTTCACTTTCACCAAAAACCCATTGAAGCTTAGCCATGTCTGAGCTTGAAGTTTCTCGCTCAGAAAAGAAGAAGAAGAAGCACCGCAGCAAAGATGAAGATCATGACACCACCACTAACGCTGTTGCGCTTGCAGACTCCGACCCGACTCAGAAAGACTCCGACTTTATGATCAAACCGCAGAGCTTCACTCCCCCGATTGACACCTCTCAATGGCCGATTCTCCTCAAGAACTATGACCGCCTCAACGTACGAACCGGACACTACACTCCAATCCCCGCTGGTTACTCTCCCCTGAAGCGCCCTCTTCCAGAGTACATCAAGTACGGTGTGATGAACCTTGATAAACCGGCGAACCCTTCTTCTCATGAGGTCGTAGCTTGGATTAAACGGATCCTCCGGGTAGAGAAAACGGGTCACAGTGGCACTCTGGATCCGAAAGTCACCGGGAACCTTATTGTTTGCATTGACAGAGCGACCCGGCTGGTGAAATCACAACAGGGTGCTGGAAAAGAGTATGTCTGTGTTGCCCGGTTGCACTCTGCGGTGCCGGATGTTGCAAAGGTGGCGCGTGCGTTAGAAACGCTTACTGGGGCTGTGTTTCAGAGGCCACCACTGATTTCTGCAGTGAAGAGGCAGCTTAGGATCAGGACTATATATGAAAGTAAGCTTCTTGAGTATGATACAGATAGGCATTTGGTTGTGTTTTGGATTTCCTGTGAAGCAGGTACCTATGTTAGGACTTTGTGCGTTCACTTGGGTTTAATTCTGGGTGTGGGAGGGCATATGCAGGAGCTTAGGAGGGTGCGTTCTGGTATTTCGGGTGAGAAAGATAACATGGTTACAATGCATGATGTGATGGATGCTCAATGGGTTTATGATAATTTCAGGGATGAGAGTTATTTGAGGAGGGTTATTATGCCATTAGAAGTTATTTTAACTAGTTATAAGAGATTGGTTGTGAAAGATTCATCTGTGAATGCTATTTGTTATGGAGCTAAGCTTATGATTCCTGGGTTGTTGAGGTTTGAGAATGATATTGAGGTTGGGGAGGAAATTGTGCTTATGACTACCAAAGGTGAGGCGATTGCATTAGGCATTGCTGAGATGACTACTGCAGTTATGGCAACTTGTGATCATGGTGTGGTGGCTAAGATTAAAAGGGTGGTGATGGATCGAGATACCTATCCAAGGAAGTGGGGCTTAGGTCCAAGGGCTTCCATGAAGAAGAAGCTGATTGCAGAAGGGAAACTCGATAAGCATGGCAAGTCAAATGAGAATACTCCTCAAGAGTGGCTGAGGAACCTGGTTTTACCCACTGGTGGAGATGAAATGATTGCAGGAATGGCTGCTGCCCCTGAAACAGATGCAGTGAAGAAGGAGGCTGTTGTAGAAGAGAAGGAAAAGACTAAGAAGGAGGAAGATGGTGAGGGGCGTAAAAGAAAGAAGGTTGAAAGCAGTGATAGCCCTGCAGCTCTTCCTGCTAAGAAGCTGAAAGTTGAAGAACTTGAAGAGGTTGAGAGGGAAGTAAAGGTGAAGGTTAAGAAGGTGAAAGAAGATGCAGTAGAGTTTGAAGTCGAGAAGAAAGAGAAGAAGAAAAAGAAGAAGAAAGATAAAGAGAACGAAGTAGCATCTTCGGATGAGGAGAAAACGGAAAAGGAGAAAAAGAAGAAGCACAAAGAAAAAGAAAAGGTTGAAGCTGGTTCACCTGATGTTGAGAAATCTGAGAAGAAGAAAAAGAAAAAGAAGGACAAGGAGGGTGAAACCAATGCTACGGAGATCACAAATGAAAAGGAAAATGGCGACGCTGATAAGAGTGAGAAGAAAAAGCATAAGAAGAAGAAAAGTAAAGATGCAGAGGAAGAATAGATGTCTGAGCTTGAAGTTTCTCGCTCAGAAAAGAAGAAGAAGAAGCACCGCAGCAAAGATGAAGATCATGACACCACCACTAACGCTGTTGCGCTTGCAGACTCCGACCCGACTCAGAAAGACTCCGACTTTATGATCAAACCGCAGAGCTTCACTCCCCCGATTGACACCTCTCAATGGCCGATTCTCCTCAAGAACTATGACCGCCTCAACGTACGAACCGGACACTACACTCCAATCCCCGCTGGTTACTCTCCCCTGAAGCGCCCTCTTCCAGAGTACATCAAGTACGGTGTGATGAACCTTGATAAACCGGCGAACCCTTCTTCTCATGAGGTCGTAGCTTGGATTAAACGGATCCTCCGGGTAGAGAAAACGGGTCACAGTGGCACTCTGGATCCGAAAGTCACCGGGAACCTTATTGTTTGCATTGACAGAGCGACCCGGCTGGTGAAATCACAACAGGGTGCTGGAAAAGAGTATGTCTGTGTTGCCCGGTTGCACTCTGCGGTGCCGGATGTTGCAAAGGTGGCGCGTGCGTTAGAAACGCTTACTGGGGCTGTGTTTCAGAGGCCACCACTGATTTCTGCAGTGAAGAGGCAGCTTAGGATCAGGACTATATATGAAAGTAAGCTTCTTGAGTATGATACAGATAGGCATTTGGTTGTGTTTTGGATTTCCTGTGAAGCAGGTACCTATGTTAGGACTTTGTGCGTTCACTTGGGTTTAATTCTGGGTGTGGGAGGGCATATGCAGGAGCTTAGGAGGGTGCGTTCTGGTATTTCGGGTGAGAAAGATAACATGGTTACAATGCATGATGTGATGGATGCTCAATGGGTTTATGATAATTTCAGGGATGAGAGTTATTTGAGGAGGGTTATTATGCCATTAGAAGTTATTTTAACTAGTTATAAGAGATTGGTTGTGAAAGATTCATCTGTGAATGCTATTTGTTATGGAGCTAAGCTTATGATTCCTGGGTTGTTGAGGTTTGAGAATGATATTGAGGTTGGGGAGGAAATTGTGCTTATGACTACCAAAGGTGAGGCGATTGCATTAGGCATTGCTGAGATGACTACTGCAGTTATGGCAACTTGTGATCATGGTGTGGTGGCTAAGATTAAAAGGGTGGTGATGGATCGAGATACCTATCCAAGGAAGTGGGGCTTAGGTCCAAGGGCTTCCATGAAGAAGAAGCTGATTGCAGAAGGGAAACTCGATAAGCATGGCAAGTCAAATGAGAATACTCCTCAAGAGTGGCTGAGGAACCTGGTTTTACCCACTGGTGGAGATGAAATGATTGCAGGAATGGCTGCTGCCCCTGAAACAGATGCAGTGAAGAAGGAGGCTGTTGTAGAAGAGAAGGAAAAGACTAAGAAGGAGGAAGATGGTGAGGGGCGTAAAAGAAAGAAGGTTGAAAGCAGTGATAGCCCTGCAGCTCTTCCTGCTAAGAAGCTGAAAGTTGAAGAACTTGAAGAGGTTGAGAGGGAAGTAAAGGTGAAGGTTAAGAAGGTGAAAGAAGATGCAGTAGAGTTTGAAGTCGAGAAGAAAGAGAAGAAGAAAAAGAAGAAGAAAGATAAAGAGAACGAAGTAGCATCTTCGGATGAGGAGAAAACGGAAAAGGAGAAAAAGAAGAAGCACAAAGAAAAAGAAAAGGTTGAAGCTGGTTCACCTGATGTTGAGAAATCTGAGAAGAAGAAAAAGAAAAAGAAGGACAAGGAGGGTGAAACCAATGCTACGGAGATCACAAATGAAAAGGAAAATGGCGACGCTGATAAGAGTGAGAAGAAAAAGCATAAGAAGAAGAAAAGTAAAGATGCAGAGGAAGAATAGCTTAGCTGAAAGCATAGTTTGTATTTTGGTTGACAGGGAACCATGGATGTATTGCCGCTTTCTTGATCTTTCATAATTTTTAATTGTTATGCAATGAGTATGTCATTTTGTTCATCAATAATTTTGATGTTTAATTTTTACTTTT 3902 0.4454 MSELEVSRSEKKKKKHRSKDEDHDTTTNAVALADSDPTQKDSDFMIKPQSFTPPIDTSQWPILLKNYDRLNVRTGHYTPIPAGYSPLKRPLPEYIKYGVMNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCVARLHSAVPDVAKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDTDRHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGISGEKDNMVTMHDVMDAQWVYDNFRDESYLRRVIMPLEVILTSYKRLVVKDSSVNAICYGAKLMIPGLLRFENDIEVGEEIVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPRASMKKKLIAEGKLDKHGKSNENTPQEWLRNLVLPTGGDEMIAGMAAAPETDAVKKEAVVEEKEKTKKEEDGEGRKRKKVESSDSPAALPAKKLKVEELEEVEREVKVKVKKVKEDAVEFEVEKKEKKKKKKKDKENEVASSDEEKTEKEKKKKHKEKEKVEAGSPDVEKSEKKKKKKKDKEGETNATEITNEKENGDADKSEKKKHKKKKSKDAEEE 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g00862 610 Pfam PUA domain 305 377 IPR002478 GO:0003723
Bach7g00862 610 CDD PseudoU_synth_hDyskerin 96 278 - -
Bach7g00862 610 MobiDBLite consensus disorder prediction 1 52 - -
Bach7g00862 610 CDD PUA_Cbf5 303 377 - -
Bach7g00862 610 PANTHER CENTROMERE/MICROTUBULE BINDING PROTEIN CBF5 11 550 IPR004802 GO:0006396
Bach7g00862 610 SUPERFAMILY Pseudouridine synthase 57 302 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Bach7g00862 610 MobiDBLite consensus disorder prediction 1 27 - -
Bach7g00862 610 SMART DKCLD_2 56 114 IPR012960 -
Bach7g00862 610 ProSiteProfiles PUA domain profile. 304 379 - -
Bach7g00862 610 Coils Coil 488 551 - -
Bach7g00862 610 Pfam tRNA pseudouridylate synthase B C-terminal domain 235 301 IPR032819 -
Bach7g00862 610 SUPERFAMILY PUA domain-like 304 385 IPR015947 -
Bach7g00862 610 Pfam DKCLD (NUC011) domain 57 114 IPR012960 -
Bach7g00862 610 Pfam TruB family pseudouridylate synthase (N terminal domain) 118 234 IPR002501 GO:0006396
Bach7g00862 610 Gene3D Pseudouridine synthase 90 296 - -
Bach7g00862 610 MobiDBLite consensus disorder prediction 446 475 - -
Bach7g00862 610 MobiDBLite consensus disorder prediction 444 484 - -
Bach7g00862 610 FunFam H/ACA ribonucleoprotein complex subunit CBF5 90 296 - -
Bach7g00862 610 MobiDBLite consensus disorder prediction 513 610 - -
Bach7g00862 610 MobiDBLite consensus disorder prediction 513 595 - -
Bach7g00862 610 NCBIfam RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5 64 389 IPR004802 GO:0006396
Bach7g00862 610 NCBIfam uncharacterized domain 2 301 376 IPR004521 GO:0003723
Bach7g00862 610 Gene3D PUA domain 57 388 IPR036974 GO:0003723
Bach7g00862 610 SMART pua_5 305 379 IPR002478 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g00862 Bach-Chr7 19843749 19845817 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g00862 1 460 NAC Transcription Factor Family AT3G57150 80.208 0.0 735
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g00862 K11131 - jre:108999000 806.594