Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g00848 ATGACGAGACAGAAGATACCTATCAAGAAGATCGATAACCTAGCAGCAAGGCAGGTAACTTTTTCCAAGAGAAGGAGAGGGCTTTTCAAGAAGGCTCAGGAACTTTCAACCCTTTGTGATGCTGAAATTGCTCTCATAGTTTTTTCTGCTACTGGCAAGCTCTTTAACTACGCTAGTTCTAGCAGCATTCATGAGAAGGGGCAGCTGATTGAAAGGTGCAGTCTTCATTCAGAGATTAACGGATCAGATCAATCTAAGCACCCGCAGGTTGAGAGTGGCAACTATAACATGCTGCGTGATGAAGTAGCAGATAAGACTCTTGAATTGAGGCAGTTGAAGGGGGAAGATTTGCAAGGATTGGGAATACAACAATTACAGAAACTAGAGGAAATGGTTGAAACAGGTTTAACTCGCGTTGTAAGGGCAAAGGATGAAAGAATTGCAAAAGAGCTCAGTGCACTCAAGAGGAAGGGATTCCTCCTGCAGGAAGAAAACCGGCAGTTGAAACAGAGGCTTACAAATCAAGAAGGCCAGTTATCTGAGTCATTGATAATATGCAGCTCATCTGATACTCCTCAAGATTATAAAAGTTCTGACGCCTCTCTCAAGCTGGGGTTGTCTTTGGTTTAG 630 0.4317 MTRQKIPIKKIDNLAARQVTFSKRRRGLFKKAQELSTLCDAEIALIVFSATGKLFNYASSSSIHEKGQLIERCSLHSEINGSDQSKHPQVESGNYNMLRDEVADKTLELRQLKGEDLQGLGIQQLQKLEEMVETGLTRVVRAKDERIAKELSALKRKGFLLQEENRQLKQRLTNQEGQLSESLIICSSSDTPQDYKSSDASLKLGLSLV 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g00848 209 Coils Coil 125 145 - -
Bach7g00848 209 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Bach7g00848 209 ProSiteProfiles K-box domain profile. 88 178 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach7g00848 209 Gene3D - 13 80 IPR036879 GO:0003677|GO:0046983
Bach7g00848 209 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bach7g00848 209 SUPERFAMILY SRF-like 2 71 IPR036879 GO:0003677|GO:0046983
Bach7g00848 209 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bach7g00848 209 Coils Coil 95 115 - -
Bach7g00848 209 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 170 - -
Bach7g00848 209 CDD MADS_MEF2_like 3 72 IPR033896 GO:0000977|GO:0045944
Bach7g00848 209 Pfam K-box region 84 172 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach7g00848 209 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bach7g00848 209 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bach7g00848 209 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bach7g00848 209 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g00848 Bach-Chr7 19750664 19756963 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g00848 1 206 MADS-box Gene Family AT2G22540 45.267 4.02e-58 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Bach7g00848 K-box 5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g00848 - - tcc:18608209 211.075