Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g00838 GCAGCTTCAAAATTCCTGTTTGGAAAGGTAGAAAATTTGTTCAAATTTCCTCGAGTAGGCAACACAGAGTGAGAGATTCAGGCTTTGCTTACGAAATTTGGTAGTAGGAAGAGTGAGTGTTTGTGATTGATGCTTGAGAAATGGATATAGTAAATCCGCAGCCACTGCAAGCAAGACCCTTCGATGATGGAGAGCTTCAACTGGTGCAGGTTCCCATGCATGTGGATGGGATTGACGATGGAGTGAACACCCAATATGTCAATGGAAGTTTTGACAACGTCAGCAATGGAGTGGAAGAAGCTAGAGTGAGTTCTGGGTTATCTGGGGCAAATGGTTGTGCTGCGCAGCCTCGAACCAGTGAGCTCACCATTGCCTTTGAAGGAGAGGTCTACGTTTTCCCTGCGGTTACCCCCGAAAAGGTGCAGGCTGTATTATTACTCTTGGGAGGCCATGAGATGCCCAATAGTGTCCCCAGCGCTGAGTTTTTGCAGCAACAAGATATGAGGGGAATAAATGATGCTTCACAAGGTTCAAAGCTTTCACGGAGAATTGCATCCCTTGTTAGGTTCCGTGAAAAGCGGAAAGAGAGATGCTTTGAGAAGAAAATTCGGTATACATGCCGTAAAGAAGTTGCTCAGAGGATGCATCGCAAGAATGGACAATTTGCGTCAGTGAAGGAGTGCTACAACCCTGCTGGTGTAAACTGGGATTCAAACAGTAGTGCTCCTTGTCCAGAATCTACTGAACGTAGATGTCAGCATTGTGGAATTAGTGAGAAGTGTACTCCAGCCATGCGTCGAGGACCTGCTGGTCCGAGATCTCTGTGCAACGCATGTGGGCTTATGTGGGCAAATAAGGGAACTCTCAGAGATCTCACTAAATCAGGAAGGGTCTCAACTTTTGAACAAAATGAACTGGATTCGTCAACAGATATAAAGCCTTCAACAACAGAACCAGAAAATTCTTGTCCTGACCAAGATGACGCAGTAAGCCTGGAAGAGAGTAAGCCCGTACAATCAGATTCCAGACAGTCACCGAAGAGGACAAATGGGCAGTATATGCTCGCAACTGCCGAAGCAGTTAATGACGACTTAACCATCCAAGTGGAGAATCCTGCTATGGATCTTCATGATCAGGAGACCCTTGACGATCTTGCTGATGCTTCTGGAACAGAATTTGAGATTCCTGCAGGTTTTGATGAGCAGGTTGACATTGATGCTTCCAACATAAGGACTTACTGGCTCTGATATGGAGATGTTGCAATCTTGC 1269 0.4586 MDIVNPQPLQARPFDDGELQLVQVPMHVDGIDDGVNTQYVNGSFDNVSNGVEEARVSSGLSGANGCAAQPRTSELTIAFEGEVYVFPAVTPEKVQAVLLLLGGHEMPNSVPSAEFLQQQDMRGINDASQGSKLSRRIASLVRFREKRKERCFEKKIRYTCRKEVAQRMHRKNGQFASVKECYNPAGVNWDSNSSAPCPESTERRCQHCGISEKCTPAMRRGPAGPRSLCNACGLMWANKGTLRDLTKSGRVSTFEQNELDSSTDIKPSTTEPENSCPDQDDAVSLEESKPVQSDSRQSPKRTNGQYMLATAEAVNDDLTIQVENPAMDLHDQETLDDLADASGTEFEIPAGFDEQVDIDASNIRTYWL 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g00838 368 CDD ZnF_GATA 204 247 IPR000679 GO:0006355|GO:0043565
Bach7g00838 368 SMART tify_2 68 103 IPR010399 -
Bach7g00838 368 Pfam CCT motif 136 178 IPR010402 GO:0005515
Bach7g00838 368 PANTHER GATA TRANSCRIPTION FACTOR 28 34 347 IPR045280 GO:0006355
Bach7g00838 368 ProSiteProfiles CCT domain profile. 136 178 IPR010402 GO:0005515
Bach7g00838 368 MobiDBLite consensus disorder prediction 253 304 - -
Bach7g00838 368 Pfam tify domain 70 102 IPR010399 -
Bach7g00838 368 MobiDBLite consensus disorder prediction 288 304 - -
Bach7g00838 368 MobiDBLite consensus disorder prediction 253 277 - -
Bach7g00838 368 SMART GATA_3 199 252 IPR000679 GO:0006355|GO:0043565
Bach7g00838 368 ProSitePatterns GATA-type zinc finger domain. 205 232 IPR000679 GO:0006355|GO:0043565
Bach7g00838 368 ProSiteProfiles Tify domain profile. 68 103 IPR010399 -
Bach7g00838 368 Pfam GATA zinc finger 205 241 IPR000679 GO:0006355|GO:0043565
Bach7g00838 368 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 201 254 - -
Bach7g00838 368 Gene3D - 198 257 IPR013088 GO:0006355|GO:0008270
Bach7g00838 368 ProSiteProfiles GATA-type zinc finger domain profile. 199 255 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g00838 Bach-Chr7 19650796 19655625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g00838 74 248 Tify Gene Family AT1G51600 55.978 1.01e-62 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bach7g00838 CCT 5.7e-14 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g00838 - - gmx:102669848 456.447