Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g00670 ATGGCTGATGCGAGCGTCGACTGTTTGCAACTGGTTAACGGGGACTTTGATGGGTTCAATGCTGACGATACCGACGTGCTTATAGATCTTGATGCAGTTCTCAGCGTGCTTGATGAGGACTCTGATCCTTCTGAGAGTAGTCGAGACAATTCTTCATTGAAGAATGTGTCACCTGGAGAGTCTGGTACCCATGATAATTCTCAGCTTCAAAGTGGTGATTCTGTGATTGACTATGAAAATGAAAACCAGGGACCTTCTATACAGACTTGCTCTTCCCTGCATGCTTTCCCTGGAAGTTTCTGGGATGTAGACTCTGTGATTGAAAGTGAAGGGATTTGGCCTACAGAAAGGGCGGGTTTTTCTGGATCTCAGATACCCACTCATGATGCTAAAGCACATTTAAACAATCTGTCTGATTGTGGAGATAGTGTGTCTCGGAGTCTATTGAACAGTGACAATGAGAGCCAGTTCAAGCCCATGGGAGACGATGTTGAATCTGGATATGCTTCACACAGCCCTATGATTGGGGATTTTGATGTAAATTTTGGCCACTATGAAGGTTTTGATGAAGATACTACTGGTGGAGTTTCTGGGCAACAAGAAAACGACTCATGTACATCGTTTGAAATGCCATTCATGGATGCTGATAGGTCTTTGCATATTGCAACTTCAAATGATTCTACAATTTGCCAAGGTTCCAATGTTCTTAGTGATTATAGAGACTACAATTCATCCTTACTTTATTGCATGGGTACAGATGATAGACCTTTTGTTACTGACCCATGTCTTGGTTATTTGGCTAATGGTGTTGGTTATCAAGTTTGGTCAACTGAGGAACAAACGGTGACTAACATGAAAGATGAGAAGGTGGAGTTCTTAGCTGATACTGCACACATGAGTAGTAGCATGCATTCAACTACTAGTGGGGGAATAACTTTCCAAGATAGTAAATTTGTGTTCCCGGAGAGTGGACATTCTTCACATTTTGCTGGTAATATTCTACTTGAAGACAAGGGGTCGGTACAACCTTCACATCATGCTCCATACATGCAAAGCCTAGACCAAGCAACTTGTGTGAGAGATGAAAGAAATAAACTGATTACTGCTTACCAAAATTCTTCTTACTTAGATGATACTGAGTTTAATACAGGGCAAGTCATGAAACGATTACCTGATATTTTTCCTTTCAGTGAATGTCAGAGTTTTGATTTCTTAAAGCATGAGGATAAAGATACAGTTATAACGTCCAATGGTTCTCGGCAATATCAAGATATAAATTATGGAACTGCTTGTAAGTTTCCAGGAACCATGGGCAATTTGAATTTAGTAACCTTAGATGAATCTCTGCCCCATGCTGAGACCTCAACAATAGCAAGTGAGAATAAGTTTGGTTGTGTACAGAGTCAAGGAGGGGGTGCATTATTTCACCATGTAAGTGTTGATTCTCATCTTTCAAAAGTAGGAACAGAAGTGATTCACAGAGATTTCTTTGAGAAATCCCATGTTGAGGGTGACTCTGATGTTTGCATTATTGAAGAAATCAGTCACCCTGCACCTACAAGTCGGTTTGCTAGCCTTGGGAATTCTCTCAGTGTATCACAGTGTTCTACATATGATGATGCCCGTCCACGTATGGCAGCTAACACAAGGGCGAAGGCGTGTGATGAGCGATATATATTAAGAGTGGCATTACAGGATCTATCTCAGCCAAAATCAGAGGATACCCCACCAGATGGATTACTTTCAGTTCCTCTTCTAAGGCATCAGAGAATTGCTTTATCATGGATGGTTCAAAAAGAAACCTCAACTTCATATTGCTCGGGAGGAATTCTTGCAGATGATCAGGGACTTGGAAAAACAGTGTCAACTATTGCTTTATTACTAAAGGAAAGACCTTCAATATTTAGACCTCATCAAAATGAACAAAAAGGTGAATTAGAAACTTTGAATCTGGATGCAGATGATGATGTGCTTCCTGAGAATGGTGGAATTAATGTGAGTGGGGATATGTCCAATAGATGTTCAAATGCAACAAAAAGCATGGATCAAGCAAAGGGAAGGCCATCTGCAGGAACTCTGATTGTTTGCCCGACTAGTGTCCTAAGGCAGTGGGCTGACGAGTTAAATACCAAAGTAACCAGTAAAGCCAATCTCTCTGTGCTAATGTACCATGGCAGCAATCGTACAAAAGATCCTTATGAGCTGGCCAAGTATGATGTTGTTCTTACTACTTATTCAATTATCACCATGGAGGTGCCTAAGCAGCCAGTGGTTGACAAAGAGGATGACGAGAAAGGAAATTCTGAAGACCATGCTGTTCCACTAACAGTGTCAAGCAAGAAAAGGAAGTACCCTTCTAGTAGAAGTGGGAAGAAGGGATCGGATAATGCATTGCTTGAGGCTATTACTGGTCCTCTAGCAAGGGTGGCATGGTTTAGAGTTGTTTTGGATGAGGCCCAGAGTATAAAGAATCACAGAACCCAAGTTGCAAGGGCATGTTGGGGTCTTCGTGCTAAGCGTAGATGGTGTTTGTCAGGGACTCCTATCCAAAATGCAATTGATGATCTCTATAGTTACTTCAGATTTCTCAGATATGAGCCTTATGCAGTTTATCAATATTTCTGTTCTACAATTAAGATACCAATTAGCAGGAATCCAAGCAAAGGTTATAAGAAGCTACAAGCTGTCCTAAAGACGATCATGCTACGTCGAACCAAAGGCACCCTTCTTGATGGAGAACCTATCATTTCCTTGCCACCAAAATCTGTGGAGCTGAGAAAAGTGGATTTTTCACCAGAGGAGCGTGATTTTTACTCAAGACTAGAAGCTGATTCACGTGCGCAGTTTCAGGAATATGCGGATGCTGGAACTGTTAAGCAAAATTATGTCAACATCTTGCTGATGCTCTTGCGCCTTCGACAAGCTTGTGACCACCCTCTGCTTGTTAGGCCCTATAATTCTAATTCTTTATGGAAATCTTCAGAGATGGTTAAGAAGCTTCCTCGAGAGAAGCAAATATCTCTTCTGAATTCCTTGGAAAATAATCTGGCTCTCTGTCGTATCTGTAATGATCCTCCTGAAGATGCTGTTGTCGCATCTTGTGGTCACGTTTTCTGTAATCAGTGCATTTGCGAACATCTTAATGCTGATAACAATCAATGCCCTGCAACAAATTGCAAAACTCAATTAAACATGTCTTCAGTGTTCTCCAAATCTACATTAAGTAGTTCTCTGTCTGACCAGACTTCTGATAATTTGCCTGGTTGCTCTGACTCTGAAGTTGTGGGATTTGAGCCTTTTTATCAGAGTCTGCCACAGGATTCTTCAAAAATTAAGGCTGCTCTTGAGGTCTTGCAATCTTTGTGTAAACCACAAGGCCATACAACAAATGACATTTCCATGCAGAGCGCTTCTAGGGAAAGTGGTGTCTGCATTGGGAACTCATCTGATTCTCACAACGGGAAATTGTCCATGGATTCTCCTCAGAGTCAAAATCCGTCAGGGGATAGAAGCTCCAATGCTTCAGTTACTGTGGTTGGAGAGAAAGCAATAGTGTTTTCTCAGTGGACAAGGATGCTAGATTTGCTTGAAGCATGTCTTAGAAATTCCTCGATTCAGTACAGAAGGCTTGATGGAACAATGTCAGTTATTGCAAGAGACAAAGCGGTCAAAGATTTTAACACTCTCCCTGAGGTATCAGTTATGATTATGTCTTTGAAAGCTGCTAGTCTTGGTCTCAACATGGTGGCGGCTTGCCATGTTCTTTTGTTGGACCTTTGGTGGAATCCCACAACAGAAGATCAAGCAATTGACAGAGCACATCGCATTGGGCAAACTCGTCCTGTTACAGTTTTGCGATTAACCGTGAGAGATACAGTTGAAGATCGCATTTTAGCTCTACAGCAAAAGAAGCGAAAGATGGTTTCCTCTGCATTTGGAGAAGATGGAGCTGGTGGTCGCCAGAGTCGCCTCACCGTGGATGATTTGAAATACTTGTTCATGATGTGATTAGACATAGATACATACATACAGATTAGTTTTTAGGATTTCCTGTTGTTCTGTTTTCTGGGGGCAGGACAGATATCACAGAAGGTTTATTCTTTTCGGTGGCTGCAAAAGAAACAGCAGGCAGGATATTTTCTGACAGTGGATGGAAAGTGGTAAGACATATGCTCTCTTGACAGTTGACGTGAAGATTATTGTGGGAACTTGTCATAGAAGCAGATCAGATGATTCATTCTCTAACCTAGAATTTTTTAGGTAAAAATCTTTTCTTACATTTGTATAGGATGTAGAGACCAGCAGGACTAGCATAGACAGCAGCAAAGATAGAAAAGAAAAACATGCAGTCTTTTTTGTTGTAAATAATAATAGATGGTATTGTTTTC 4388 0.412 MADASVDCLQLVNGDFDGFNADDTDVLIDLDAVLSVLDEDSDPSESSRDNSSLKNVSPGESGTHDNSQLQSGDSVIDYENENQGPSIQTCSSLHAFPGSFWDVDSVIESEGIWPTERAGFSGSQIPTHDAKAHLNNLSDCGDSVSRSLLNSDNESQFKPMGDDVESGYASHSPMIGDFDVNFGHYEGFDEDTTGGVSGQQENDSCTSFEMPFMDADRSLHIATSNDSTICQGSNVLSDYRDYNSSLLYCMGTDDRPFVTDPCLGYLANGVGYQVWSTEEQTVTNMKDEKVEFLADTAHMSSSMHSTTSGGITFQDSKFVFPESGHSSHFAGNILLEDKGSVQPSHHAPYMQSLDQATCVRDERNKLITAYQNSSYLDDTEFNTGQVMKRLPDIFPFSECQSFDFLKHEDKDTVITSNGSRQYQDINYGTACKFPGTMGNLNLVTLDESLPHAETSTIASENKFGCVQSQGGGALFHHVSVDSHLSKVGTEVIHRDFFEKSHVEGDSDVCIIEEISHPAPTSRFASLGNSLSVSQCSTYDDARPRMAANTRAKACDERYILRVALQDLSQPKSEDTPPDGLLSVPLLRHQRIALSWMVQKETSTSYCSGGILADDQGLGKTVSTIALLLKERPSIFRPHQNEQKGELETLNLDADDDVLPENGGINVSGDMSNRCSNATKSMDQAKGRPSAGTLIVCPTSVLRQWADELNTKVTSKANLSVLMYHGSNRTKDPYELAKYDVVLTTYSIITMEVPKQPVVDKEDDEKGNSEDHAVPLTVSSKKRKYPSSRSGKKGSDNALLEAITGPLARVAWFRVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYEPYAVYQYFCSTIKIPISRNPSKGYKKLQAVLKTIMLRRTKGTLLDGEPIISLPPKSVELRKVDFSPEERDFYSRLEADSRAQFQEYADAGTVKQNYVNILLMLLRLRQACDHPLLVRPYNSNSLWKSSEMVKKLPREKQISLLNSLENNLALCRICNDPPEDAVVASCGHVFCNQCICEHLNADNNQCPATNCKTQLNMSSVFSKSTLSSSLSDQTSDNLPGCSDSEVVGFEPFYQSLPQDSSKIKAALEVLQSLCKPQGHTTNDISMQSASRESGVCIGNSSDSHNGKLSMDSPQSQNPSGDRSSNASVTVVGEKAIVFSQWTRMLDLLEACLRNSSIQYRRLDGTMSVIARDKAVKDFNTLPEVSVMIMSLKAASLGLNMVAACHVLLLDLWWNPTTEDQAIDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKRKMVSSAFGEDGAGGRQSRLTVDDLKYLFMM 1335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g00670 1335 Pfam Helicase conserved C-terminal domain 1178 1277 IPR001650 -
Bach7g00670 1335 MobiDBLite consensus disorder prediction 39 71 - -
Bach7g00670 1335 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 552 904 IPR027417 -
Bach7g00670 1335 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 600 866 IPR014001 -
Bach7g00670 1335 CDD DEXDc_SHPRH-like 585 904 - -
Bach7g00670 1335 FunFam SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 786 916 - -
Bach7g00670 1335 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1003 1096 IPR013083 -
Bach7g00670 1335 SMART helicmild6 1194 1277 IPR001650 -
Bach7g00670 1335 SMART ring_2 1019 1057 IPR001841 -
Bach7g00670 1335 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1171 1330 IPR001650 -
Bach7g00670 1335 Pfam Zinc finger, C3HC4 type (RING finger) 1019 1055 - -
Bach7g00670 1335 MobiDBLite consensus disorder prediction 757 794 - -
Bach7g00670 1335 FunFam SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 670 761 - -
Bach7g00670 1335 Pfam SNF2-related domain 598 981 IPR000330 GO:0005524|GO:0140658
Bach7g00670 1335 SUPERFAMILY RING/U-box 1016 1063 - -
Bach7g00670 1335 Gene3D - 558 649 IPR038718 -
Bach7g00670 1335 Gene3D - 919 1334 IPR027417 -
Bach7g00670 1335 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 912 1334 IPR027417 -
Bach7g00670 1335 MobiDBLite consensus disorder prediction 1143 1174 - -
Bach7g00670 1335 MobiDBLite consensus disorder prediction 48 71 - -
Bach7g00670 1335 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 496 1334 - -
Bach7g00670 1335 CDD SF2_C_SNF 1180 1287 - -
Bach7g00670 1335 Gene3D - 783 916 IPR038718 -
Bach7g00670 1335 SMART ultradead3 581 873 IPR014001 -
Bach7g00670 1335 ProSiteProfiles Zinc finger RING-type profile. 1019 1058 IPR001841 -
Bach7g00670 1335 ProSitePatterns Zinc finger RING-type signature. 1034 1043 IPR017907 -
Bach7g00670 1335 Gene3D - 673 762 IPR038718 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g00670 Bach-Chr7 17609538 17618812 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g00670 508 1334 RAD5 or RAD16-like Gene Family AT1G61140 61.933 0.0 982
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Bach7g00670 SNF2_N 1.5e-68 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g00670 - - lang:109332935 1541.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach11g00891 11 7678027 7678414 Bach7g00670 7 17609538 17618812 BWGD