Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g00637 ATGTCTGACCGCGAAGATCACACCTCTCTTCTGAATACTAAAGGTAATCGTGGTGGTTCATCTCCTGACCGTGGCTATCGTAACAAGTCCACATCTCGTGGTCCTAATGATGAGAGGTTGAGGATCAAAAAGAGAGATGGAGAGAGGGGAGGTTTCCATGAGCACCGTCTCAGAGACTATAAGGATGGAAGCTCTAGAGGAAGGGGCAACTATGATCATCATCGTAATCGTAATCGTGACAGGCATCATAGTCATGTTCGAGAAGAGGAAATGACGCTCAGACATGGAAGACATTCCGGTTACAGATCCAGAAGGGAATCTAGATCACATTCCAGATCACCTTCACGTTCAGAAAGCAAAAGGACCAGTGGTTTTGACATGGCACCACCAGATGTGGCTGTGATGCCCGCTGCTGTTCTTCCAGGAACTGCGCAAAATTTTTCATCAGTTGGGATGTCGCAGATTGGAGCACTTTCATTGATGCCAGTTCAAGCTATGACGCAGCAGGCTACAAGGCATGCGCGTCGTGTGTATGTTGGTGGACTTCCCCCTTTGACTAATGAGCAGGCAATTGCAACATTCTTCAGCCACGTTATGAATGCTATTGGAGGAAATTCTTCTTGTGCAGGTGATTCTGTTGTAAATGTCTACATTAATCATGAGAAGAAATTTGCATTTGTGGAGATGAGAACTGTTGAAGAAGCTAGTAATGCAATGGCATTAGATGGAATTGTATTTGAGGCAATTGTTGGGGAGGATTGCTACATTGCTTTGTGCATCATATATGTTAGGCTTGATTGTTCTCCATACAAGTGGGAAGGTGTTGCCGTAAGGGTTCGTAGGCCTACAGATTATAATCCTTCATTAGCTGCTGTTCTAGGTCCAAGCCAGCCTAGTCCCCACCTCAAGTTGTCTGCAGTTGGGCTTGCTCCAGGACCAATTGGTGGAACTGAGGGACCTGACCGCATCTTTGTGGGTGGGCTACCATACTACTTCACTGAAGCCCAAATAAGAGAATTGCTCCAATCTTTTGGAACTCTCCGTGCTTTTGATCTGGTTAAGGATAAAGACACTGGAAATTCTAAAGGATATGGTTTCTGCATATACCAGGATCCTGCTGTAACTGACATTGCTTGTGCTGCCCTCAATGGTCTTAAAATGGGTGATAAAACACTGACTGTAAGGCGTGCTACTTTCAGCGGACAATCCAGAACAGAACATGATCATATCTTTGCGCGGGCACAACAGGATATAGTAATGCAGAAAATAGCCCTGGAAGTTGGTGGAGTGAATCTTCCGGGAACAGAAAGAGTGCCAGCAATGAATGATGAAACCCCAACAAAAGTTTTATGCTTGACTGAGGCCATCACTCTTGATCAACTGAGGGATGATAATGAGTATGATGAAATATTGGAAGACATGCGGGATGAATGCTGCAAATTTGATTGTGATAATTTCCTCTACCTGCTTGAAATGGATAGGGACTTTGATAAATGTTGTCATTCCTCGTCCAAATCACACTGGAGAGCTGCTTCCAGGTGTTGGGAAGGTACAAAATTCAGTTCTACTGCATTTGATCAGTTGCTTCCGGTTCTGGTGTTCTTGGAATATTCTGATAATGTCGGTTGTTCCACGGCAAGGAATGCACTACATGGAAGGAAGTTTGGAGGCAATGTTGTGAGTGCCGTTTATTATCCAGAAGCAGAATATCATGATGGGGAGTATGGGTATGGTGCATAA 1740 0.4454 MSDREDHTSLLNTKGNRGGSSPDRGYRNKSTSRGPNDERLRIKKRDGERGGFHEHRLRDYKDGSSRGRGNYDHHRNRNRDRHHSHVREEEMTLRHGRHSGYRSRRESRSHSRSPSRSESKRTSGFDMAPPDVAVMPAAVLPGTAQNFSSVGMSQIGALSLMPVQAMTQQATRHARRVYVGGLPPLTNEQAIATFFSHVMNAIGGNSSCAGDSVVNVYINHEKKFAFVEMRTVEEASNAMALDGIVFEAIVGEDCYIALCIIYVRLDCSPYKWEGVAVRVRRPTDYNPSLAAVLGPSQPSPHLKLSAVGLAPGPIGGTEGPDRIFVGGLPYYFTEAQIRELLQSFGTLRAFDLVKDKDTGNSKGYGFCIYQDPAVTDIACAALNGLKMGDKTLTVRRATFSGQSRTEHDHIFARAQQDIVMQKIALEVGGVNLPGTERVPAMNDETPTKVLCLTEAITLDQLRDDNEYDEILEDMRDECCKFDCDNFLYLLEMDRDFDKCCHSSSKSHWRAASRCWEGTKFSSTAFDQLLPVLVFLEYSDNVGCSTARNALHGRKFGGNVVSAVYYPEAEYHDGEYGYGA 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g00637 579 CDD RRM2_U2AF65 321 397 - -
Bach7g00637 579 SUPERFAMILY RNA-binding domain, RBD 446 569 IPR035979 GO:0003676
Bach7g00637 579 SUPERFAMILY RNA-binding domain, RBD 316 403 IPR035979 GO:0003676
Bach7g00637 579 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 175 284 IPR000504 GO:0003723
Bach7g00637 579 PANTHER RNA-BINDING PROTEIN 19 574 - -
Bach7g00637 579 Gene3D - 169 250 IPR012677 -
Bach7g00637 579 CDD RRM3_U2AF65 447 563 - -
Bach7g00637 579 MobiDBLite consensus disorder prediction 30 74 - -
Bach7g00637 579 SMART rrm1_1 176 251 IPR000504 GO:0003723
Bach7g00637 579 SMART rrm1_1 322 395 IPR000504 GO:0003723
Bach7g00637 579 Gene3D - 297 372 IPR012677 -
Bach7g00637 579 Gene3D - 442 574 IPR012677 -
Bach7g00637 579 MobiDBLite consensus disorder prediction 12 29 - -
Bach7g00637 579 CDD RRM1_U2AF65 174 282 - -
Bach7g00637 579 MobiDBLite consensus disorder prediction 1 129 - -
Bach7g00637 579 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 177 246 IPR000504 GO:0003723
Bach7g00637 579 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 323 392 IPR000504 GO:0003723
Bach7g00637 579 FunFam U2 snRNP auxiliary factor large subunit 297 410 - -
Bach7g00637 579 SUPERFAMILY RNA-binding domain, RBD 95 246 IPR035979 GO:0003676
Bach7g00637 579 MobiDBLite consensus disorder prediction 82 97 - -
Bach7g00637 579 Gene3D - 270 394 IPR012677 -
Bach7g00637 579 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 321 399 IPR000504 GO:0003723
Bach7g00637 579 FunFam U2 snRNP auxiliary factor large subunit 170 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g00637 Bach-Chr7 17147516 17156019 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g00637 323 397 Eukaryotic Initiation Factors Gene Family AT1G71770 28.000 2.42e-06 48.5