Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g00624 ATGAAAGGAGACACCTGGCTAAGAATGGATAGTGGATTGTTTTTTGCTTCTGAAAGCCGCGACGAAAGACACGCTGCACCCTCGTTTGTTTCGCTCTGTCTTTTTCTCAATTGCCATTATAGCTTCTTCTCAAGAAGTTTCTTTGCGTACGGAAGGACCGCATGGCCAAAGCTTCTCCCTTTCTACTTCTGGGTTAAAGGAGTGGTAGTGGCAAAATCTGTAACAGAAGGTCCACGATCCATGGCCTTTGAGCACTGCTATTCTCAGGAATGGAAATCCATCCCAAGTGCTGTAACAGAGACAGAAGATTCTAACGGTTGTTTTGATTGCAACATCTGCTTAGACTTTGCACATGAACCAGTTGTCACCCTCTGCGGCCACCTTTACTGCTGGCCCTGCATCTACAAGTGGCTTCATATCCAAAGTGGTTCTCTTGAATCTGATGAGCACCCGCGATGCCCAGTTTGCAAGGCTGATATATCTCATACCACAATGGTACCACTGTATGGCCGGGGCCAGCCCTCAGCTCAGAGTCAGCATGATGGGAAGGCATCTTTTCGTGATATATTTGTGCCACCGAGGCCACCGGCTTCTGGTGCTCAAACTCTGGTGGGGACATCATCTCAAAGTGTTCAGCAACTCCCACATCGTAGTCCTTATCAGAATGCTTCCTCACAAATGCTGAATCATGAAGCCACCATGACGCCAGGATTCAACCACCCTGTGGTTGGAATGTTTGGAGAGATGGTTTATTCTAGAATGTTTGGCAACCCAGAAAACCTGTATGCCTATCCGAATTCTTATCACCTGATGGGAAGTAACAGCAATAGATTGAGAAGGCAGGAAATGCAGGCAGACAAGTCACTGAACAGAATTTCAATTTTCCTCTTTTGCTGTTTTCTCTTGTGTCTTATTGTATTTTGAGTACGGAAAATTTTCTCATTCCCTTACTGTATATTTTGTAAAGAGGCACGGAAGCGAGCTCAAGAACTTAGTAGATAATGTAAGTTACTATATTATAGGCTAAAAAACTTGTGTTCTTCATTGTTCCAGTACACAATAATAGAGCTTTATTTTGC 1079 0.4421 MKGDTWLRMDSGLFFASESRDERHAAPSFVSLCLFLNCHYSFFSRSFFAYGRTAWPKLLPFYFWVKGVVVAKSVTEGPRSMAFEHCYSQEWKSIPSAVTETEDSNGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHIQSGSLESDEHPRCPVCKADISHTTMVPLYGRGQPSAQSQHDGKASFRDIFVPPRPPASGAQTLVGTSSQSVQQLPHRSPYQNASSQMLNHEATMTPGFNHPVVGMFGEMVYSRMFGNPENLYAYPNSYHLMGSNSNRLRRQEMQADKSLNRISIFLFCCFLLCLIVF 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g00624 307 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 94 170 IPR013083 -
Bach7g00624 307 Pfam Zinc finger, C3HC4 type (RING finger) 110 156 IPR018957 GO:0046872
Bach7g00624 307 SMART ring_2 110 156 IPR001841 -
Bach7g00624 307 SUPERFAMILY RING/U-box 106 169 - -
Bach7g00624 307 ProSitePatterns Zinc finger RING-type signature. 125 134 IPR017907 -
Bach7g00624 307 ProSiteProfiles Zinc finger RING-type profile. 110 157 IPR001841 -
Bach7g00624 307 FunFam E3 ubiquitin-protein ligase RMA1H1 isoform A 86 210 - -
Bach7g00624 307 CDD RING-HC_AtRMA-like 108 158 - -
Bach7g00624 307 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 80 304 IPR045103 GO:0005783|GO:0006511|GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g00624 Bach-Chr7 16871799 16875508 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g00624 103 293 C3H Transcription Factor Family AT4G27470 41.748 4.86e-47 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g00624 K10666 - qsa:O6P43_031837 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach7g00624 7 16871799 16875508 Bach7g00624 7 16871799 16875508 ECH