Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g00623 ATGGGTCAAATGATTTGTGGTTCTTGTCGTCGCCTACTTTCTTACCCACAGGGTTCCAAATATGTCAAATGTTCTTGCCGTCAGACAATCAACCTTGTGTTAGAAGCTCATCAGGTTGGGCAAGTTAAGTGTGGGAAATGTGCAGTATTGCTAATGTACCCTTATGGTGCTCCACATGTTAGGTGTAGCTCCTGCCGACTTGTGACAGAAATTGGGGCACACAACAGGCGGCCTCTGTGGTCAGTACAACAAGAAAATCAAGCTCCCAAAACTGTTTGTTAG 282 0.4539 MGQMICGSCRRLLSYPQGSKYVKCSCRQTINLVLEAHQVGQVKCGKCAVLLMYPYGAPHVRCSSCRLVTEIGAHNRRPLWSVQQENQAPKTVC 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g00623 93 Pfam LSD1 zinc finger 6 26 IPR005735 -
Bach7g00623 93 Pfam LSD1 zinc finger 44 67 IPR005735 -
Bach7g00623 93 NCBIfam zinc finger domain, LSD1 subclass 3 33 IPR005735 -
Bach7g00623 93 NCBIfam zinc finger domain, LSD1 subclass 41 69 IPR005735 -
Bach7g00623 93 PANTHER PROTEIN LSD1 1 87 IPR040319 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g00623 Bach-Chr7 16841784 16843070 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Bach7g00623 zf-LSD1 1.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g00623 - - gmx:100780865 156.377