Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g00622 ATGCAAGGTCTAGAAGTGAAGATGGAAGAAGACGATGAAGGCCCGCCACCTGGGTGGAAACCCATAGAGAAAATGCGAAGTCCAAAGGTGAAGGAAGAAGAAGACGATGAAGGTCCACCACCTGGGTATCAACCTATAGAGAAAAAGCAAAGCCAAGAAATGAAGGAAGAAGAAGACGATGAAGGTCCACCGCCAGGGTGGCAACCTATCCATCCTCCACCTTCGCAATCGATCCCTCCGCCGGCATCGAAACCACCTCGGCCATCCGAAATGGGTCAGATGGTTTGTGGTTCTTGTCGTCGCCTACTTTCTTACCCACAGGGTTCCAAATATGTCAAATGTTCTTGCTGTCAGACAATCAACCTTGTGTTAGAAGCTCATCAGGTTGGGCAAGTTAAGTGTGGGAAATGTGCAGTATTGCTAATGTACCATTACGGTGCTCCACAAGTTAGGTGTTGCTCCTGCCGATTTGTGACAGAAATTGGGGCACACAACAGGCGGCCTCCGTGGTCAGTACAACAAGGAAAATCAGCTCCTCCTCCCAAAACTGTTTGTTAGCTGTAATAGCTGGACGATCCTTGTATAACTTGCTTGATGAGGTACATAAATAAATTAAAAGTTGTTTTGTTTGAGACATACGCTCATGTATATAAGCA 656 0.4649 MQGLEVKMEEDDEGPPPGWKPIEKMRSPKVKEEEDDEGPPPGYQPIEKKQSQEMKEEEDDEGPPPGWQPIHPPPSQSIPPPASKPPRPSEMGQMVCGSCRRLLSYPQGSKYVKCSCCQTINLVLEAHQVGQVKCGKCAVLLMYHYGAPQVRCCSCRFVTEIGAHNRRPPWSVQQGKSAPPPKTVC 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g00622 185 MobiDBLite consensus disorder prediction 49 64 - -
Bach7g00622 185 MobiDBLite consensus disorder prediction 1 42 - -
Bach7g00622 185 MobiDBLite consensus disorder prediction 1 91 - -
Bach7g00622 185 Pfam LSD1 zinc finger 134 158 IPR005735 -
Bach7g00622 185 Pfam LSD1 zinc finger 96 120 IPR005735 -
Bach7g00622 185 PANTHER PROTEIN LSD1 50 177 IPR040319 -
Bach7g00622 185 NCBIfam zinc finger domain, LSD1 subclass 93 123 IPR005735 -
Bach7g00622 185 NCBIfam zinc finger domain, LSD1 subclass 131 159 IPR005735 -
Bach7g00622 185 MobiDBLite consensus disorder prediction 65 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g00622 Bach-Chr7 16766993 16769993 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Bach7g00622 zf-LSD1 1.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g00622 - - qsa:O6P43_012641 191.43