Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bach7g00622 | ATGCAAGGTCTAGAAGTGAAGATGGAAGAAGACGATGAAGGCCCGCCACCTGGGTGGAAACCCATAGAGAAAATGCGAAGTCCAAAGGTGAAGGAAGAAGAAGACGATGAAGGTCCACCACCTGGGTATCAACCTATAGAGAAAAAGCAAAGCCAAGAAATGAAGGAAGAAGAAGACGATGAAGGTCCACCGCCAGGGTGGCAACCTATCCATCCTCCACCTTCGCAATCGATCCCTCCGCCGGCATCGAAACCACCTCGGCCATCCGAAATGGGTCAGATGGTTTGTGGTTCTTGTCGTCGCCTACTTTCTTACCCACAGGGTTCCAAATATGTCAAATGTTCTTGCTGTCAGACAATCAACCTTGTGTTAGAAGCTCATCAGGTTGGGCAAGTTAAGTGTGGGAAATGTGCAGTATTGCTAATGTACCATTACGGTGCTCCACAAGTTAGGTGTTGCTCCTGCCGATTTGTGACAGAAATTGGGGCACACAACAGGCGGCCTCCGTGGTCAGTACAACAAGGAAAATCAGCTCCTCCTCCCAAAACTGTTTGTTAGCTGTAATAGCTGGACGATCCTTGTATAACTTGCTTGATGAGGTACATAAATAAATTAAAAGTTGTTTTGTTTGAGACATACGCTCATGTATATAAGCA | 656 | 0.4649 | MQGLEVKMEEDDEGPPPGWKPIEKMRSPKVKEEEDDEGPPPGYQPIEKKQSQEMKEEEDDEGPPPGWQPIHPPPSQSIPPPASKPPRPSEMGQMVCGSCRRLLSYPQGSKYVKCSCCQTINLVLEAHQVGQVKCGKCAVLLMYHYGAPQVRCCSCRFVTEIGAHNRRPPWSVQQGKSAPPPKTVC | 185 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bach7g00622 | 185 | MobiDBLite | consensus disorder prediction | 49 | 64 | - | - | |
Bach7g00622 | 185 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
Bach7g00622 | 185 | MobiDBLite | consensus disorder prediction | 1 | 91 | - | - | |
Bach7g00622 | 185 | Pfam | LSD1 zinc finger | 134 | 158 | IPR005735 | - | |
Bach7g00622 | 185 | Pfam | LSD1 zinc finger | 96 | 120 | IPR005735 | - | |
Bach7g00622 | 185 | PANTHER | PROTEIN LSD1 | 50 | 177 | IPR040319 | - | |
Bach7g00622 | 185 | NCBIfam | zinc finger domain, LSD1 subclass | 93 | 123 | IPR005735 | - | |
Bach7g00622 | 185 | NCBIfam | zinc finger domain, LSD1 subclass | 131 | 159 | IPR005735 | - | |
Bach7g00622 | 185 | MobiDBLite | consensus disorder prediction | 65 | 87 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bach7g00622 | Bach-Chr7 | 16766993 | 16769993 | Tandem |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-LSD | Bach7g00622 | zf-LSD1 | 1.7e-10 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bach7g00622 | - | - | qsa:O6P43_012641 | 191.43 |