Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g00474 ATGGAATTCCCCAAGAAGCGCAAAACGGAAGAGAACGGGAACAATGATTCTCCGCCGTCTTCCGCCTACATCACCACCCTTTCGCCGGAAGACGTCCGCAAGATCCTCCAGCCAATATCCCAAGACCAACTCCTTGAACTTCTTCAGTCTGCGGCTCTTCGTCACCCAGATGTTCTAGAAGCTATTCGTTCTGTTGCCGATCGCGATTCGACTCTCCGGAAACTCTTCGTCCGTGGCCTGGCCGGAGAAACCACCACGGACACGGTTCGCAGTGTCTTTTCCTCCTTTGGGGAACTCGATGAGGCCATTGTTATCTTCGATAAATCGACTGGAAAGTCCAAAGGTTACGGCTTTGTCAAGTTTAGGTACGTGGATGGTGCTATACTGGCGCTGAAGGAACCCAGCAAGAAAATTGATGGGAGAATGACGGTGACCCAGTATGCTGCTGCTGGGTTGTCAGGTGGCCCCGGCACCAATGGGCCAGCGGCAGCGGCGAGCGATGTTTCTGCAAGAAAAATTTTTGTGGGGAACGTGCCGTTTGATATCACATCAGAGAAGCTATTGAGTCACTTTCTCATGTATGGGGAAATTGAAGAAGGGCCTCTTGGGTTTGATAAAGGGAGTGGAAAGTCAAAGGGGTTTGCTTTCTTTGTCTATAAAACAGAGGAGGGTGCAAGGGCGTCACTGGTTGAACCCACCAAGACTATTGATGGGCATCAAGTGGTTTGCAAATTGGCCATGGATAATAAGAAGGGAAAGCCAGGGGGACTTCAGAATCAAACACCTTCTGGTTTTACAGGAGATGGCATGGCAGCACAGCAACAGCAACCTTTCCCTGGTCCTGTGATGGGATCACAGTACCATTATCCTGCCCCCGGTACATTGCCTGGTAATAATTATGCCTTGCAGGGTGGTGCCGGTTATACTTCTCAGCTTCCATCTTCCTATGTTCCTGGAGGTGCATACACTGGTTCACAGTTTGGTGGGCCAACCTCTGGTGATCATAGTGGAAGGTTGCCTCCAAGTTCTGCTGGATTTGCATATGGTTCTCCTTACGGTTTGAACTCATCTGCACTTCCCTCGCAGCAGCATCAACAGTCCCGGCCAATGCCAAGACTTGCGCCAGGAGGAATGAACCAAGGCATGCCGTCCTACTACTGA 1161 0.5073 MEFPKKRKTEENGNNDSPPSSAYITTLSPEDVRKILQPISQDQLLELLQSAALRHPDVLEAIRSVADRDSTLRKLFVRGLAGETTTDTVRSVFSSFGELDEAIVIFDKSTGKSKGYGFVKFRYVDGAILALKEPSKKIDGRMTVTQYAAAGLSGGPGTNGPAAAASDVSARKIFVGNVPFDITSEKLLSHFLMYGEIEEGPLGFDKGSGKSKGFAFFVYKTEEGARASLVEPTKTIDGHQVVCKLAMDNKKGKPGGLQNQTPSGFTGDGMAAQQQQPFPGPVMGSQYHYPAPGTLPGNNYALQGGAGYTSQLPSSYVPGGAYTGSQFGGPTSGDHSGRLPPSSAGFAYGSPYGLNSSALPSQQHQQSRPMPRLAPGGMNQGMPSYY 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g00474 386 Gene3D - 64 151 IPR012677 -
Bach7g00474 386 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 75 141 IPR000504 GO:0003723
Bach7g00474 386 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 173 241 IPR000504 GO:0003723
Bach7g00474 386 MobiDBLite consensus disorder prediction 321 338 - -
Bach7g00474 386 SUPERFAMILY RNA-binding domain, RBD 64 149 IPR035979 GO:0003676
Bach7g00474 386 MobiDBLite consensus disorder prediction 354 369 - -
Bach7g00474 386 SMART rrm1_1 74 146 IPR000504 GO:0003723
Bach7g00474 386 SMART rrm1_1 172 244 IPR000504 GO:0003723
Bach7g00474 386 PANTHER GEO13361P1-RELATED 56 305 - -
Bach7g00474 386 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 171 262 IPR000504 GO:0003723
Bach7g00474 386 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 73 150 IPR000504 GO:0003723
Bach7g00474 386 MobiDBLite consensus disorder prediction 1 23 - -
Bach7g00474 386 MobiDBLite consensus disorder prediction 321 386 - -
Bach7g00474 386 SUPERFAMILY RNA-binding domain, RBD 156 259 IPR035979 GO:0003676
Bach7g00474 386 Gene3D - 161 276 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g00474 Bach-Chr7 14992516 14993676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g00474 163 341 C2H2 Transcription Factor Family AT2G19380 32.995 4.16e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g00474 K12741 - zju:107411269 443.736