Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g00429 CCTTCTTTTTCTCTCTCATTTCTTTAAGTAGCAGAGGAATCCTGCCTTCTCTGTCCATATCTTGTCTTTTAATCTTAGTCTTCATCATAATATAAGTAAAGAAAAGGCTGTTAATTGTCTTAGTATTAGGGTTTTATTCTGTTCCGGACAGACTTTTCTGAGCTGAAAAACAATTAAGATTAAAATTCCAACAACTAGACCAAGGTTGAAGGTTTGAACCGATTCCTAGATGGGATTTCTGTGCATTTTGATTTAAAGATGGCTTCGGCAGGAAACTGTCTTATTCATTACGTGCTCTCTAACTGGGGAGCTGAAAAGATAATTTTTTTCTGATCGATTTGCTGTGGGGTATGCTGGGATTTGGTTATTATAGCTCCTAGAAGTGCCGCAGTTCGGAAATTTTGGTAACTTGTTAAGGAAATGGTAGATCAGGCAGTTTTAGGTGGTGGAGTTCTTACGAGTTTTGTCAGGGAAGAAGAGGAAGATGAGTTTCGCAGTTGCTGTGGAGATGACGAAGTATGGAAAGAAACTGAGGAGCGGGTGAAGGAAGAATTGAAGGATGATCTCGATGAATTCTCAGTAAAAATGTTCTTCAAGGGCTTGTCAATTCCAGGTGTTGGAAGTTCCATTTCTGGTTTTTCTGGCCTTGGAGTGGTCATGGAAAGACCATCTGGTATACCTGCTATTTGGGTGCAGAAAAAGCTTGATCTTTTTGTAGAGGAGGCAGTAGCTAACTACTTGGCTCTCATGGATGGCTTGGTGGAAGCTGTGCAAAATAAGATCCGCAGGGTTTATGCTTTTACAGATTCTGAGTTGTTGTACAATCAGATAATGTTAGAGAAAAATCTTGATATGCCACTTTTAATGGCACTGAGAGTAAGGATTCTGGAGCATGCCAATAACTTCGACACTTTTGCTCTGAATCTTGTTCCCAGTACTGATCTTGAGCAGCCACTGCAATTAGCCAAAGTTGCTATTGGACTTGTCTCATTTCCTACAAATAGTGAGAGATTGCTTGAAAGCTGTTCTATTTGTTGTGAGGACAAGCCATTGCCAATTATGATCACTATGAAATGTTCACACAAGTTTTGTTCACATTGCTTGAGGGCATATGCTGTTGGAAAAGTACAGTCTTGTCAAGTCCCAATAAGATGCCCTCAACCAGGATGCAAATATTACATCTCTATCACAGAGTGCAGGTCTTTTCTTCCATTTACCTCGTTTGAATCTTTGGAGAAAGCGCTTGCAGAAGCAAATGTCTGCCATTCAGATAGAATATACTGCCCATTCCCCAATTGTTCTGTTCTCCTTGATCCTCGTGAATGTTTATCAGCTAGGGCTAGCTCTTCTAGCCAGTCAGACAATTCTTGTGTTGAGTGTCCTGTTTGTCAGAGGTTTATCTGTGTCGACTGTGAGGTTCCTTGGCATTCTTCTATGACCTGTGAAGAGTACCAGAATCTACCAGAGGAGGAGAGAGATGCTTCTGACATAACCTTACATCGACTTGCTCAAAAAAAAAGGTGGAAGCGTTGTCAGCAATGTCGCCGGATGATTGAGCTCATCCAAGGGTGTTACCACATGACATGCTGGTGCGGTCACGAGTTCTGCTATTCGTGTGGCGCGGAATACAGGGATGGCCAACAGACATGCCAATGTGCATTCTGGGATGAAGACAGTTCCGAGGACTCGGTCACTCAATCGCTACAAGAATCAGAACAATGGGCATGGGAGACTTTCAATTCTCTCCCACTGATCACAGATGCTTATTCTGACCAAGAACGATCACAGCTTCAACTCATTCAAAGGTTCCTAGCTGGGGGTTTCAGCCTGGCTGATCATCATCCTTACCAATCTCCACCGCGCTGTACAGATTCCTACGTAGACGCCATGAAGGATCTCCATCAGCTTCCATGGCTTGAGAGGTTTGTGTCTGTGATAAGTGACAACTACTATGAAGACTATATTCAATGA 1971 0.4247 MVDQAVLGGGVLTSFVREEEEDEFRSCCGDDEVWKETEERVKEELKDDLDEFSVKMFFKGLSIPGVGSSISGFSGLGVVMERPSGIPAIWVQKKLDLFVEEAVANYLALMDGLVEAVQNKIRRVYAFTDSELLYNQIMLEKNLDMPLLMALRVRILEHANNFDTFALNLVPSTDLEQPLQLAKVAIGLVSFPTNSERLLESCSICCEDKPLPIMITMKCSHKFCSHCLRAYAVGKVQSCQVPIRCPQPGCKYYISITECRSFLPFTSFESLEKALAEANVCHSDRIYCPFPNCSVLLDPRECLSARASSSSQSDNSCVECPVCQRFICVDCEVPWHSSMTCEEYQNLPEEERDASDITLHRLAQKKRWKRCQQCRRMIELIQGCYHMTCWCGHEFCYSCGAEYRDGQQTCQCAFWDEDSSEDSVTQSLQESEQWAWETFNSLPLITDAYSDQERSQLQLIQRFLAGGFSLADHHPYQSPPRCTDSYVDAMKDLHQLPWLERFVSVISDNYYEDYIQ 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g00429 516 Pfam Reverse transcriptase-like 71 172 IPR002156 GO:0003676|GO:0004523
Bach7g00429 516 ProSitePatterns Zinc finger RING-type signature. 219 228 IPR017907 -
Bach7g00429 516 Gene3D - 55 188 IPR036397 GO:0003676
Bach7g00429 516 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 199 284 IPR013083 -
Bach7g00429 516 FunFam RBR-type E3 ubiquitin transferase 339 464 - -
Bach7g00429 516 ProSiteProfiles TRIAD supradomain profile. 198 416 IPR044066 -
Bach7g00429 516 ProSiteProfiles Zinc finger RING-type profile. 202 246 IPR001841 -
Bach7g00429 516 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 156 463 IPR031127 GO:0004842|GO:0016567
Bach7g00429 516 Pfam IBR domain, a half RING-finger domain 361 410 IPR002867 GO:0008270
Bach7g00429 516 Pfam IBR domain, a half RING-finger domain 273 341 IPR002867 GO:0008270
Bach7g00429 516 SUPERFAMILY RING/U-box 354 418 - -
Bach7g00429 516 FunFam RBR-type E3 ubiquitin transferase 197 282 - -
Bach7g00429 516 Coils Coil 35 55 - -
Bach7g00429 516 FunFam RBR-type E3 ubiquitin transferase 54 189 - -
Bach7g00429 516 CDD Rcat_RBR_unk 367 403 - -
Bach7g00429 516 SMART ibrneu5 269 341 IPR002867 GO:0008270
Bach7g00429 516 SMART ibrneu5 351 410 IPR002867 GO:0008270
Bach7g00429 516 Gene3D - 337 465 - -
Bach7g00429 516 SUPERFAMILY RING/U-box 200 277 - -
Bach7g00429 516 CDD BRcat_RBR_unk 283 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g00429 Bach-Chr7 14218325 14223010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g00429 53 401 C3H Transcription Factor Family AT2G19610 25.895 2.37e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g00429 - - gmx:100783040 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach7g00429 7 14218325 14223010 Bach7g00429 7 14218325 14223010 ECH