Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g00421 ATGGCAGCTTCGGTTCCGGCGACTCAGAACAAGATCCGATGGGGGGAGCTAGAGGAGGACGACGGAGAGGACCTGGACTTTTTGCTGCCGCCGCGACAGGTGATAAGTCCAGATGAGAACGGGATAAAGAAGGTGATTGAGTACAAATTCGATGAAGATGGAAATAAAGTGAAGATTAGTACTACCACTCGCACTCGCAAGCTAGCTAATGCTCGCCTCAGTAAGCGTGCCGTTGAGAGGCGATCCTGGGCTAAGTTTGGTGATGCTGTACAAGAGGATGTCGGTAGCAGGCTCACCATGGTTTCCACTGAGGAAATCCTCCTTGAGCGACCAAGGGCTCCGGGTAGCAAGGCAGAAGAACCAAAGGCTGCTGGAGACCCATTGGCTCAATTGCAGAAGCCTGGTGCTGTTCTCATGGTTTGTAGGACTTGTGGGAAGAAGGGTGATCACTGGACATCAAGGTGTCCTTACAAGGATCTTGCCCCACCGGCTGAAGGGTTTATCGATAAGCCTGCTGTATCAGAAGCCGCAACTGCTGTTCCTGGTACTAAAACATACGTTCCTCCTGGTCTGAGAGGAGGAGTTCAAGATAGGTCTGGATCAGATATGCGAAGGAGGAATGATGAAAATTCTGTTCGGGTCACCAACCTCTCCGAGGATACAAGAGAGCCTGATTTGCTTGAGCTGTTCCGTCCTTTTGGTGCTGTGAGCAGAGTCTATGTTGCTGTTGATCAGAAGACTGGCATGAGCAGAGGATTTGGTTTTGTTAACTTTGTAAACAGGGAAGATGCTCAGAGAGCCATCAATAAGCTCAATGGATATGGTTACGACAATCTCATCCTTAGAGTTGAATGGGCGACCCCAAGAACAAACTAA 876 0.4954 MAASVPATQNKIRWGELEEDDGEDLDFLLPPRQVISPDENGIKKVIEYKFDEDGNKVKISTTTRTRKLANARLSKRAVERRSWAKFGDAVQEDVGSRLTMVSTEEILLERPRAPGSKAEEPKAAGDPLAQLQKPGAVLMVCRTCGKKGDHWTSRCPYKDLAPPAEGFIDKPAVSEAATAVPGTKTYVPPGLRGGVQDRSGSDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRTN 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g00421 291 SMART rrm1_1 211 284 IPR000504 GO:0003723
Bach7g00421 291 MobiDBLite consensus disorder prediction 183 208 - -
Bach7g00421 291 Gene3D - 189 291 IPR012677 -
Bach7g00421 291 FunFam Eukaryotic translation initiation factor 3 subunit G 174 291 - -
Bach7g00421 291 Pfam Eukaryotic translation initiation factor 3 subunit G 33 160 IPR024675 -
Bach7g00421 291 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 20 287 - -
Bach7g00421 291 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 212 278 IPR000504 GO:0003723
Bach7g00421 291 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 210 288 IPR000504 GO:0003723
Bach7g00421 291 PIRSF Transl_init_eIF-3_RNA-bind 3 291 IPR017334 GO:0003743|GO:0005737|GO:0005852
Bach7g00421 291 SUPERFAMILY RNA-binding domain, RBD 198 290 IPR035979 GO:0003676
Bach7g00421 291 CDD eIF3G 40 159 IPR024675 -
Bach7g00421 291 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 11 290 IPR017334 GO:0003743|GO:0005737|GO:0005852
Bach7g00421 291 CDD RRM_eIF3G_like 211 286 IPR034240 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g00421 Bach-Chr7 14032872 14034494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g00421 10 289 Eukaryotic Initiation Factors Gene Family AT3G11400 69.649 1.50e-152 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g00421 K03248 - qsu:112022532 506.138