Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g00412 ATGCCGGTTAGAGCGCGCCGCACGCAGGCAGCAAAGCTAAAGAGCTCTCTACTCTTCTTCAGTTCTAGTGACAAGAATATCAGTCCGAAGATGTCTAGAATATGTGTGAAAAACCTTCCCAAAATCTGTACAGAGGACCAACTACGGGAAAAATTTTCTCAGAAAGGAGAAATAACAGACATAAAGCTTATGCGCACCAAAGATGGCAAGAGTAGGCAATTTGCTTTTATTGGGTTTCGCACAGAGCATGAAGCTGAGGAAGCTATTAAATATTTCGATAAAACCTACATTCAAACCTGTAGAATTGTTTGTGAGGTAGCTCAAAAAATTGGGGATCCTAATATTCCTCGTCCATGGAGTCGGCATTCATTAAAGAAGGAAGAAAAAGTGACCCAAGATGGGAAAAAAGAAGCGGGAAATAAAAGTGTTGCTAGGGCTAGAGGAGGAGAGAACATGAAGGACAATGATGACCCAAAGCTTGAAGAATTTCTTCAGGTTATGCAATCTCGTGTTAAGTCAAAAGTGTGGGCAAATGACACATTAGCAGTTTCTGATAATGTCTGTGAGAAGCAAGAAATGGCAAAGAAGAAAACGAAAGATACATCAGGTCCAATGGAGGCTGATCTTTTCCACGATGAAGTTGTTTCGGATATGGAATATTTCAAGAGTAGAGTGACAAAAGAATGGTCTGATTCTGAAAGTAGTGATGATGAAGAAAAAGACAGTGATTCATTAAACAGAAAAGATGATGAGAAAGACAGCACTAGTCAAGATAACAAAGATGAAGAAAATATTCATGATAAATCTTCTAAAGGAACTGGAAGAAGTGGCAGTCGAAAGATACACCAGGAAGGCCAAGAATATACCTCTGGACGGGATGTTTCCCAGGAAAAGGCTGAAGAAAAAAGTCATTCTGATTATTCTGGTGATGAAGTACCTGAGCAAGGGGTCCCAACATCGAGTTTGGAAGATGATAATGGAGTTTTTGAATCCTGTCGACTGTTTGTCCGTAATCTGCCATATACAGCCACTGAGGAGGAACTGGAAGAACACTTCAGTAAGTTTGGCAGTGTTTCAGAGGTTCATCTAGTTATTGATAAAAATACAAAGCGATCCAAGGGAATAGCATATGTTCTTTATACACATCCAGAGTTTGCAGCCAGGGCGCTAGCAGAGCTCGACAAATCAATCTTTCAAGGAAGATTGTTGCATGTTATGCAGGCCGTAAGAAAACCTTCAGACAAGGAGAATAATGTTTCTACAGGCCAAAGTTCTAAAACGTTAAAGCAACAAAGGATGGAAGAGAGGAAAGCATCTGAAGCTAGCGGAGATACTAGAGCATGGAATAGTCTGTTCATGCGCCCTGATACAGTTGTTGAAAACATTGCTCGGAAATATGGTGTAAGTAAAAGTGATTTGCTTGACAGAGAAGCTGATGATCTTGCTGTGCGTATTGCTCTGGGAGAAACACAAGTTATTGCAGAGACCAAAAATGCCCTTACAAATGCTGGAGTGAATGTAGATGCTTTGGAGGAATTTGCCAGCGGTAAAGTTGATGGTGCAAAAAGAAGTAATCATGTGCTTGTAGCGAAGAATTTGCCCTATGGTTCTTCAGAAAATGAACTGGCAAAGATGTTTGGGAAATATGGTAGTTTGGATAAAATAATTCTCCCTCCAACAAAAACATTGGCCTTGGTTGTTTTTCTTGAACCAGTTGAAGCTCGAGCTGCTTTTAGAGGGTTAGCTTACAAGCGTTACAAGGATGCTCCGTTGTATTTGGAGTGGGCTCCTTCCAATGTTCTTAGCCAAAGTTCATCATCTAAGAATAATGAAATGAGTAATGCAGTTGGTGCAAATGATGCCAAGCGGCTGATACTGGAGCAAAATGTGGAAGGAATATCAGATGCAGACATTGACCCAGATAGAGTAGAGGCACGGTCTTTGTTTGTCAAGAACCTCAATTTCAAGACATCAGATGAGAGTTTAAAGCGACATTTTAGTGAACACTTAAAAGAGGGAAGAATTTTGAGTGCCAAGGTGAAGAAGCACTTAAAGAATGGTAAAAATGTTTCTATGGGTTTTGGATTCATTGAGTTTGATTCTGTGGAGACTGCTACAAATGTTTGCAGAGATTTACAGGGGACTGTTCTGGATGGGCATGCTCTTATTTTACAACTTTGTCATGTCAAAAATGATACGCAAGTACTGAATACATCTGACAAGGATAGGAGTTCAACAAAGTTGCTTGTCAGAAATGTAGCTTTCGAGGCAACAGAGAAGGATTTGAGACAGTTGTTTAGCCCATTTGGCCAGATTAAGAGTTTAAGGTTGCCAATGAAGTTTGGAAGTCATAGAGGCTTTGCTTTCGTAGAGTATATTACACAGCAGGAGGCAAAAAATGCGCTTAAAGCACTGTCAAATACTCACTTGTATGGCAGGCATCTGGTGATAGAGAGAGCAAAGGAAGGTGAGAGTTTGGAAGAACTAAGAGCCAGAACAGCTGCACAATTTAGTGATGAGCAAAATGGATATCAAAATTCTGCCAAATTGTCCAAGAAAAGGAAGCACATGGCAATTTTAGATGAGGGGAAGATAAAATTTGAAAGATTTGCTGATTAA 2619 0.4013 MPVRARRTQAAKLKSSLLFFSSSDKNISPKMSRICVKNLPKICTEDQLREKFSQKGEITDIKLMRTKDGKSRQFAFIGFRTEHEAEEAIKYFDKTYIQTCRIVCEVAQKIGDPNIPRPWSRHSLKKEEKVTQDGKKEAGNKSVARARGGENMKDNDDPKLEEFLQVMQSRVKSKVWANDTLAVSDNVCEKQEMAKKKTKDTSGPMEADLFHDEVVSDMEYFKSRVTKEWSDSESSDDEEKDSDSLNRKDDEKDSTSQDNKDEENIHDKSSKGTGRSGSRKIHQEGQEYTSGRDVSQEKAEEKSHSDYSGDEVPEQGVPTSSLEDDNGVFESCRLFVRNLPYTATEEELEEHFSKFGSVSEVHLVIDKNTKRSKGIAYVLYTHPEFAARALAELDKSIFQGRLLHVMQAVRKPSDKENNVSTGQSSKTLKQQRMEERKASEASGDTRAWNSLFMRPDTVVENIARKYGVSKSDLLDREADDLAVRIALGETQVIAETKNALTNAGVNVDALEEFASGKVDGAKRSNHVLVAKNLPYGSSENELAKMFGKYGSLDKIILPPTKTLALVVFLEPVEARAAFRGLAYKRYKDAPLYLEWAPSNVLSQSSSSKNNEMSNAVGANDAKRLILEQNVEGISDADIDPDRVEARSLFVKNLNFKTSDESLKRHFSEHLKEGRILSAKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTVLDGHALILQLCHVKNDTQVLNTSDKDRSSTKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHRGFAFVEYITQQEAKNALKALSNTHLYGRHLVIERAKEGESLEELRARTAAQFSDEQNGYQNSAKLSKKRKHMAILDEGKIKFERFAD 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g00412 872 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 34 102 IPR000504 GO:0003723
Bach7g00412 872 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 531 589 IPR000504 GO:0003723
Bach7g00412 872 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 334 404 IPR000504 GO:0003723
Bach7g00412 872 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 648 722 IPR000504 GO:0003723
Bach7g00412 872 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 748 815 IPR000504 GO:0003723
Bach7g00412 872 MobiDBLite consensus disorder prediction 413 428 - -
Bach7g00412 872 FunFam Multiple RNA-binding domain-containing protein 1 517 619 - -
Bach7g00412 872 MobiDBLite consensus disorder prediction 240 309 - -
Bach7g00412 872 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 627 738 - -
Bach7g00412 872 SMART rrm1_1 747 818 IPR000504 GO:0003723
Bach7g00412 872 SMART rrm1_1 33 105 IPR000504 GO:0003723
Bach7g00412 872 SMART rrm1_1 647 725 IPR000504 GO:0003723
Bach7g00412 872 SMART rrm1_1 333 406 IPR000504 GO:0003723
Bach7g00412 872 SMART rrm1_1 527 594 IPR000504 GO:0003723
Bach7g00412 872 PANTHER RNA-BINDING MOTIF PROTEIN 14B 251 444 - -
Bach7g00412 872 CDD RRM6_RBM19_RRM5_MRD1 746 820 - -
Bach7g00412 872 FunFam Multiple RNA-binding domain-containing protein 1 740 846 - -
Bach7g00412 872 CDD RRM3_RBM19_RRM2_MRD1 333 406 - -
Bach7g00412 872 MobiDBLite consensus disorder prediction 116 157 - -
Bach7g00412 872 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 332 410 IPR000504 GO:0003723
Bach7g00412 872 SUPERFAMILY RNA-binding domain, RBD 25 119 IPR035979 GO:0003676
Bach7g00412 872 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 32 109 IPR000504 GO:0003723
Bach7g00412 872 Gene3D - 643 735 IPR012677 -
Bach7g00412 872 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 646 729 IPR000504 GO:0003723
Bach7g00412 872 CDD RRM1_MRD1 32 107 - -
Bach7g00412 872 SUPERFAMILY RNA-binding domain, RBD 314 418 IPR035979 GO:0003676
Bach7g00412 872 Gene3D - 518 621 IPR012677 -
Bach7g00412 872 Gene3D - 736 848 IPR012677 -
Bach7g00412 872 MobiDBLite consensus disorder prediction 411 442 - -
Bach7g00412 872 Coils Coil 860 872 - -
Bach7g00412 872 SUPERFAMILY RNA-binding domain, RBD 523 612 IPR035979 GO:0003676
Bach7g00412 872 FunFam RNA-binding motif protein 19 31 130 - -
Bach7g00412 872 MobiDBLite consensus disorder prediction 225 325 - -
Bach7g00412 872 MobiDBLite consensus disorder prediction 119 157 - -
Bach7g00412 872 SUPERFAMILY RNA-binding domain, RBD 634 731 IPR035979 GO:0003676
Bach7g00412 872 Gene3D - 292 446 IPR012677 -
Bach7g00412 872 Gene3D - 11 158 IPR012677 -
Bach7g00412 872 SMART rrm2_1 333 406 IPR003954 GO:0003676
Bach7g00412 872 SMART rrm2_1 647 725 IPR003954 GO:0003676
Bach7g00412 872 SMART rrm2_1 747 818 IPR003954 GO:0003676
Bach7g00412 872 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 746 822 IPR000504 GO:0003723
Bach7g00412 872 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 526 598 IPR000504 GO:0003723
Bach7g00412 872 CDD RRM5_RBM19_like 647 727 IPR034423 -
Bach7g00412 872 CDD RRM4_RBM19_RRM3_MRD1 526 597 - -
Bach7g00412 872 SUPERFAMILY RNA-binding domain, RBD 737 825 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g00412 Bach-Chr7 13917709 13927027 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g00412 639 838 Eukaryotic Initiation Factors Gene Family AT1G49760 28.169 2.50e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g00412 K14787 - qsa:O6P43_025993 1133.63