Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g00206 ATGGGGAAGAAAGAAGGAAGAAGAAGCAACAACATCTGTACCAATTGGCTTGCAGGGAAATGCCGAAGAAACCCATGTATGTTCTTGCACGCTAAACCCCAGTCACAACTCTCTGAGCCTAAAAGTTCTATCGTTTCGAAGAACCCCAATGGGAAAAAACCCAAGAATTTGCTTTCTCCTCCTACCAAAGGCTCTGGGTCTGTCTCAAAAGAGGCAAATTCAAATCAGAAGCAGGAAATCTGCAAGTTTTGGCTTCTGGACAAGTGCAATTACGGCGATAGATGCAGAAAGTTGCATTCTTGGTTCACTGGGAAAGGGTTCTCAATGTTGGCGAAACTTGAAGGCCACAAGAAGCCAATCACAGGAATTTCCCTCCCTCTGGGTGACAACAAGCTCTATTCCGCAAGTTCAGATGGCAGTATGCGAATATGGGATTGCGGCTCGGCCCAATGTATCAGAGAAATCAAAGCTAACCTTGAACTTGGGCCATTGATCAGTGAAGGCTCCTGGGTATTTTTGGGTATGCCTAATGTTGTTAAAGCTTGGGACTTTAAAACTGGTATGAAAGTCAGTCTCGCTGGTGGATCCTTTGGGAAAGTGTATGCTATGGCCACTAGTGATAATATGCTTTTTGCTGCAACACAAAGTGGGGGGATTTTGGCTTGGAAAGTATGTGGTTCTGATCAAAACCCATTTGAATTAGTTGGGGTTTTGAAGGGTCATACAAGGGCTGTTGTGTCTCTATTTGTTGGATGTGCAGGGAAGAGGTTGTTTTCTGGCTCAATGGACAAAACCATTAGGTTTTGGGATCTTGAAAGATTGGTGTGCATTGATACACTGGTTGGGCATAGTGATGTGGTTATGTCCCTTCTTTGCTGGGATGAGTTTCTGATTTCGTGCTCGTTGGATTGTGAGATTAAAATCTGGGCAATGACACAAGAGGGGAATTTAAAGGTGACGTATACGCATAAGGAACGTGATGGGATTCTTGCACTTGGCGGAATGAATGATTCAAAGGAAAAACCAGTTCTGTTTTGCTCCTGCAATGACAATTCTGTGAGATTATATGAATTGCCATCATTCTTGGAGAGGGGAAGATTGTTTGCAAGAGAAGAGGTCAGAGTTATTGAGACTGGCCCTAATGGGCTCTTCTTCACTGGTGATGGCACTGGTCTTGTCACTGCATGGAAGTGGCTTGTTGAGCCACAGAAAGATTAA 1218 0.4409 MGKKEGRRSNNICTNWLAGKCRRNPCMFLHAKPQSQLSEPKSSIVSKNPNGKKPKNLLSPPTKGSGSVSKEANSNQKQEICKFWLLDKCNYGDRCRKLHSWFTGKGFSMLAKLEGHKKPITGISLPLGDNKLYSASSDGSMRIWDCGSAQCIREIKANLELGPLISEGSWVFLGMPNVVKAWDFKTGMKVSLAGGSFGKVYAMATSDNMLFAATQSGGILAWKVCGSDQNPFELVGVLKGHTRAVVSLFVGCAGKRLFSGSMDKTIRFWDLERLVCIDTLVGHSDVVMSLLCWDEFLISCSLDCEIKIWAMTQEGNLKVTYTHKERDGILALGGMNDSKEKPVLFCSCNDNSVRLYELPSFLERGRLFAREEVRVIETGPNGLFFTGDGTGLVTAWKWLVEPQKD 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g00206 405 ProSitePatterns Trp-Asp (WD) repeats signature. 257 271 IPR019775 -
Bach7g00206 405 SUPERFAMILY CCCH zinc finger 75 100 IPR036855 GO:0046872
Bach7g00206 405 Gene3D - 167 404 IPR015943 GO:0005515
Bach7g00206 405 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 113 145 - -
Bach7g00206 405 ProSiteProfiles Zinc finger C3H1-type profile. 7 33 IPR000571 GO:0046872
Bach7g00206 405 SMART c3hfinal6 75 101 IPR000571 GO:0046872
Bach7g00206 405 SMART c3hfinal6 8 32 IPR000571 GO:0046872
Bach7g00206 405 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 238 272 - -
Bach7g00206 405 ProSiteProfiles Trp-Asp (WD) repeats profile. 238 279 IPR001680 GO:0005515
Bach7g00206 405 PANTHER - 45 401 IPR044715 -
Bach7g00206 405 ProSiteProfiles Trp-Asp (WD) repeats profile. 113 154 IPR001680 GO:0005515
Bach7g00206 405 MobiDBLite consensus disorder prediction 32 71 - -
Bach7g00206 405 Gene3D - 7 97 - -
Bach7g00206 405 ProSiteProfiles Zinc finger C3H1-type profile. 75 102 IPR000571 GO:0046872
Bach7g00206 405 SUPERFAMILY WD40 repeat-like 96 397 IPR036322 GO:0005515
Bach7g00206 405 MobiDBLite consensus disorder prediction 35 71 - -
Bach7g00206 405 Gene3D - 98 166 IPR015943 GO:0005515
Bach7g00206 405 SMART WD40_4 360 397 IPR001680 GO:0005515
Bach7g00206 405 SMART WD40_4 106 145 IPR001680 GO:0005515
Bach7g00206 405 SMART WD40_4 273 310 IPR001680 GO:0005515
Bach7g00206 405 SMART WD40_4 186 223 IPR001680 GO:0005515
Bach7g00206 405 SMART WD40_4 316 357 IPR001680 GO:0005515
Bach7g00206 405 SMART WD40_4 231 270 IPR001680 GO:0005515
Bach7g00206 405 Pfam WD domain, G-beta repeat 110 145 IPR001680 GO:0005515
Bach7g00206 405 Pfam WD domain, G-beta repeat 233 270 IPR001680 GO:0005515
Bach7g00206 405 Pfam WD domain, G-beta repeat 276 309 IPR001680 GO:0005515
Bach7g00206 405 PRINTS G protein beta WD-40 repeat signature 257 271 IPR020472 -
Bach7g00206 405 PRINTS G protein beta WD-40 repeat signature 297 311 IPR020472 -
Bach7g00206 405 PRINTS G protein beta WD-40 repeat signature 132 146 IPR020472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g00206 Bach-Chr7 8472901 8474118 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g00206 173 361 Miscellaneous Gene Families AT5G08390 25.000 2.33e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bach7g00206 WD40 0.00028 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g00206 - - cit:102613916 425.246