Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g00157 ATGGATTCTTCTTCTAGGGACAACCTCAAAAGTTGTGATACACTTGCAGGTGCAGGCAGCTCCCCAAATCCAAAGGTATCATGCAGATGGGATCCGGGTGAACCATGCAGACCTGAGATTGATGAAGCACCTGTGTTTTATCCAAGCCTTGAGGAGTTTGAGGACACTCTTGGCTATATAGCAAAGATACGTCCCATGGCCGAACCCTATGGAATATGCAGGGTTGTCCCTCCACCTTCTTGGATTCCTCCCTGCCCTCTTAAGGAGAAAAAGGTGTGGGAAGGATCACTATTTCCTACTCGTATTCAGCAAATTGACTTACTTCAAAATAGGGAGCCCATGAGAAAGAAAATAAGGGGCAGAAAACATAAAAGAAGAAAGAATTCAAGAACGGGTTCATGTAGGAGGGATCCCAATTCAGTTTCAGAAGCTGATGTTGCTTCTGAACCTGATGATAAATTTGGATTCCAAACAGGACCAGACTTCACTCTTGGACGATTTCAAAATTATGCAAACATTTTTAAGGAATGCTACTTTACAATGAAGGATGGTAAAGAGGAAATAACAATTAGCAATAATAATCAGCAGAAGAGATGGGAGCCCTCAGTGGAGGACATTGAAGGGGAATACTGGCGAATAATTGAGCTACCAACGGATGAGGTTGAGGTGCTTTATGGCGCCGACTTGGAAGCTAAAGCACTTGGAAGTGGTTTTCCTAAGGCTGATCCCTTAACTAAGGGTTATTTAGATCAGTATGCCTTGTCTGGTTGGAATCTAAATAACTTCCCCAGGCTTCTGGGTTCTGTCCTTGCATTTGAAGAAAGTAATATATCAGGAGTTCTAGTACCGTGGCTATATGTTGGGATGTGTTTTTCATCATTTTGCTGGCATGTTGAGGATCATCATCTCTATTCACTTAATTATCTGCATTTTGGTGATCCGAAAGTATGGTATGGAGTACCTGGAAAGTTTGCTTCTGCTTTGGAATATGCAATGAGAAAGCATTTACCTGATTTATTTGAGGAACAGCCAAATTTACTAAATGAACTGGTGACTCAACTCTCTCCTTCAATTCTAAAATCTGAGGGAGTCCCTGTATATCGTACTGTCCAGCATTCTCGGGAATTTGTTATTACCTTTCCAAGGGCATACCATGCTGGATTCAACTGTGGTTTTAACTGTGCAGAGGCAGTGAATGTGGCCCCTGTTGATTGGTTAGTGCATGGCCAGAATGCTGTTGAGCTTTACAGTAAGCAGTGCCGGAAGACATCATTGTCACATGACAAGTTACTATTTGGTTCAGCTCTGGAAACTGTGAGAACTCTTGGGGAACTAGTCCTCCTTCGAAAGGAAACTCGAAAAAATTTGACATGGAAAAGTGTCTGTGGGAAAGATGGAGTACTTACTGAGGCAGTTAAGACAAGGATAAGGATGGAAGAAGAGAGGTTGAACTGTCTTCCAAACCATTTGAAGTTGCTAAAGATGGAGAGAGACTTTGATAACCAGACAGATAGAGAATGCTTCTCTTGCTTCTATGACTTGCACCTATCTGCAACAGGTTGTGAATGCTCTCCCAATAGATATTCTTGCCTCAGACACTTGAAATTGTTTTGTTCATGTGGAATGGACAAAAGGTTTATCCTGCTTCGTTATACAATAGATGAGCTAAATAAGTTGGTTGACGCATTAGAAAGAGATGTAGAAGCTATTGAAGTTTGGGGAAATATAATCTCTGCGATGGTTGCTGTTGATGCTGACAATGTTTCTAAGGATAAGCTAGATGTGGAGAGAGATGTGTGTAAAACCAATAGTCATGAAGGTGAAAGTTCATCTTGTTGTGCAGGAACCAAGGAGAAGTCAAATTTAAATCCTAGCAGTTCACATAGTCATGTTTCGTCAGAGTTAGTCCAGTCAGACTCTCACCATGGAACCTTTAGTGCATCATACAACACCATAGATAGTCATTATCATGGTATTAACCATAAAAAATTGATCATGAATGATGAAGTTAAGATGGAGCAGACATGTTTTATGGATTTAAATCTTGATATTGTGTCTGGTGAATATGAAACCTCGTTGCTGCACAATGATGACAACCATAAAAATCTGCGTGTGCCAGAAGTCTATTATTCTGACATCCCAAGAGAACAAGACAACATGAAACTTGATGTTGATATAAATACAAGAGACTCATTTTTTCTTCTGAATAAAGATCATCCTTCAAGTTCAAGGGATGTTCAGAGTTCTTGGGCATTAGCTGGTGGAAACTTATTTGGGGTTAACCTGAAACGGCATATACAATCAGAAGTGTTAGCTAACATTGTATCTAATATGGAAGTCCTAGACACATCCAATACAAGTATAACAATGACAGACCAAAGCTATCTCCTAATGCAAAAGTTTGGCACTTCTGTTGAGCTTATAAGTTTGGGTTCTGTTGTTTATGGAAAGCTGTGGTGCAGTAAGCATGCAATATATCCAAAAGGGTACAAGAGTCGTGTTAAATTCTTCAGCATTCTTGATCCTTCAAAGATATGTAATTATATTTCCGAAGTCCTTGATGCTGGATTTCTTGGGCCTCTTTTCAAGGTTACCATGGAAGAACATCCTAGTGTGGCTTACACAAATGTCTCTGTAGAGAAGTGCTGGGAATTGGTTCTGGAGGGAGTAAATAATGAAATTGAAAAGCAGAGGAGTCTAGGGGAACCGGAACCAACTTCCTTGCAGCCTCTGAAAAGCATTCGTGGTCTTAAAATGTTTGGATTCCTTTCCCCTTCTATTGTCAAGGCCATTGAAGCTCAGGATCCAAGACATCAATGCTTAGAGTACTGGAATCACAGGGAAGGAGGCTCTGTTTCTTCTGGAAGTACCAGTGATATCAAGTTCACAAATGGGTCTAGTAGTGCTTCTTTTGGTGACCTCACTACCAAAGATTTTGGTGTCAATCTGTTAAAGCCGGATCAAGGTATCCTGCTTAGCGAAGGAACTTGTCCTTCATTTGAAGGGATGAAATCAATATTACAAGGGTTTCTAAAAAAGGCAAGCCCTGATGAGTTAAGCACAATGCATAAGTTATTCAGCTCCAATATGCTGAATGCACAGTGGAGAGAGGCGTTCTTAGCGCTGATTGAGGAGATCCAAAAAAGCCTGTAG 3153 0.4072 MDSSSRDNLKSCDTLAGAGSSPNPKVSCRWDPGEPCRPEIDEAPVFYPSLEEFEDTLGYIAKIRPMAEPYGICRVVPPPSWIPPCPLKEKKVWEGSLFPTRIQQIDLLQNREPMRKKIRGRKHKRRKNSRTGSCRRDPNSVSEADVASEPDDKFGFQTGPDFTLGRFQNYANIFKECYFTMKDGKEEITISNNNQQKRWEPSVEDIEGEYWRIIELPTDEVEVLYGADLEAKALGSGFPKADPLTKGYLDQYALSGWNLNNFPRLLGSVLAFEESNISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHFGDPKVWYGVPGKFASALEYAMRKHLPDLFEEQPNLLNELVTQLSPSILKSEGVPVYRTVQHSREFVITFPRAYHAGFNCGFNCAEAVNVAPVDWLVHGQNAVELYSKQCRKTSLSHDKLLFGSALETVRTLGELVLLRKETRKNLTWKSVCGKDGVLTEAVKTRIRMEEERLNCLPNHLKLLKMERDFDNQTDRECFSCFYDLHLSATGCECSPNRYSCLRHLKLFCSCGMDKRFILLRYTIDELNKLVDALERDVEAIEVWGNIISAMVAVDADNVSKDKLDVERDVCKTNSHEGESSSCCAGTKEKSNLNPSSSHSHVSSELVQSDSHHGTFSASYNTIDSHYHGINHKKLIMNDEVKMEQTCFMDLNLDIVSGEYETSLLHNDDNHKNLRVPEVYYSDIPREQDNMKLDVDINTRDSFFLLNKDHPSSSRDVQSSWALAGGNLFGVNLKRHIQSEVLANIVSNMEVLDTSNTSITMTDQSYLLMQKFGTSVELISLGSVVYGKLWCSKHAIYPKGYKSRVKFFSILDPSKICNYISEVLDAGFLGPLFKVTMEEHPSVAYTNVSVEKCWELVLEGVNNEIEKQRSLGEPEPTSLQPLKSIRGLKMFGFLSPSIVKAIEAQDPRHQCLEYWNHREGGSVSSGSTSDIKFTNGSSSASFGDLTTKDFGVNLLKPDQGILLSEGTCPSFEGMKSILQGFLKKASPDELSTMHKLFSSNMLNAQWREAFLALIEEIQKSL 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g00157 1050 SMART fyrn_3 811 855 IPR003888 GO:0005634
Bach7g00157 1050 MobiDBLite consensus disorder prediction 111 153 - -
Bach7g00157 1050 ProSiteProfiles FYR domain FYRN motif profile. 797 855 IPR003888 GO:0005634
Bach7g00157 1050 Gene3D Cupin 28 401 - -
Bach7g00157 1050 MobiDBLite consensus disorder prediction 1 27 - -
Bach7g00157 1050 SMART fyrc_3 861 951 IPR003889 GO:0005634
Bach7g00157 1050 MobiDBLite consensus disorder prediction 605 637 - -
Bach7g00157 1050 ProSiteProfiles JmjN domain profile. 43 84 IPR003349 -
Bach7g00157 1050 Pfam JmjC domain, hydroxylase 284 400 IPR003347 -
Bach7g00157 1050 Pfam F/Y rich C-terminus 859 947 IPR003889 GO:0005634
Bach7g00157 1050 FunFam Putative lysine-specific demethylase JMJ16 803 941 - -
Bach7g00157 1050 ProSiteProfiles JmjC domain profile. 251 417 IPR003347 -
Bach7g00157 1050 SMART JmjN_1 42 83 IPR003349 -
Bach7g00157 1050 MobiDBLite consensus disorder prediction 603 637 - -
Bach7g00157 1050 SMART cupin_9 251 417 IPR003347 -
Bach7g00157 1050 Pfam C5HC2 zinc finger 507 559 IPR004198 -
Bach7g00157 1050 Pfam F/Y-rich N-terminus 804 852 IPR003888 GO:0005634
Bach7g00157 1050 ProSiteProfiles FYR domain FYRC motif profile. 857 948 IPR003889 GO:0005634
Bach7g00157 1050 SUPERFAMILY Clavaminate synthase-like 223 434 - -
Bach7g00157 1050 Gene3D - 800 941 - -
Bach7g00157 1050 PANTHER LYSINE-SPECIFIC DEMETHYLASE 37 669 - -
Bach7g00157 1050 Pfam jmjN domain 44 77 IPR003349 -
Bach7g00157 1050 MobiDBLite consensus disorder prediction 115 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g00157 Bach-Chr7 3507054 3516995 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g00157 799 984 JUMONJI Transcription Factor Family AT1G30810 51.613 1.39e-50 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Bach7g00157 JmjC 4.9e-44 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g00157 K11446 - gmx:100784581 1338.55