Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g00052 ATGGCTTTCTCGCTAAAAAAATCTTTTAAATCCTATGGTTCCTACAAGAATTCCAGAAAGACCTCCGTGGGGGAAGACACATACATCACTAACGAAAAGCTTCCCATTCTCTTAGATCAAGAGGATCATCATCGGCATCATCGTTCTTCTCCTCCATCAATGTCGACTGCTACTTCTTCTTCTTCAGACAGGGGAGAGGTTATCGTTAAAATCGAAGGTAGTAATCCTGCAGCTGCACAGGGGAGTAAGATTTGGAGGGAATCCAGCTACGATTTCTGGAGGGATGGTAAAGATAATGAGAAGAATGTGACTAGTGGGCGTGGTGCTAATGATGATGAAGAGAGTTTTAAGTTCCGGCATGGAACGGAGGATCCACCTTCGGAGTTGATTGGTAAGTTCTTGCACAAACAGAAAGCCTCCGGTGACGTGTCGCTGGATATGGATTTAGAGATGGACGAGTTCAAACACGACCGGAACTTACTTCCGGTGAACGAGTCTCCCATGAACAATCGGATTTCGAAGGACCTCAAAGTATCGTTCGAGGAACGGGAACTTGAAATAGCTCACGATTCCGTAAGGCGAAGGTATAATAAGGAGGGACAAGGTGACGAAGAATTTCCAAAACCTCCACTTCCTCCGCATCAAGATGGTGGTGGAGATGGAGAGGTTGTGAGGTGTACCTCGAACCGCTCCTTTGAAAGGAAATCTGCCTTGTTGAGGGCCAAAACTAAGTCAAGATTAATGGACCCACCAGAGGAACTGGACCGGAGGTCTGGTCGAGTCCTGAAATCGGGTCAATTATTCTCGGGGATGCTGGGGAAGAAAGGGGATGATGAAGAAGATGATCCATTTTTGGCAGAGGATTTACCCGATGAGTTCAAGAACAGCCACTTTAGCTTATGGGTTTTGCTTGAGTGGTTGAGTTTGGTTTTGATAGTTGGTGCTTTAACATGCACGCTTTCTATTCCATATTTGAGGAATAGGAATCTCTGGAAGCTCAAGTTATGGAAATGGGAGGTGATGGTTCTGGTTCTAATTTGTGGGCGCTTAGTTTCTGACTGGGTAATCCGGATAGTGGTATTCTTTATCGAAAGGAATTTCCTTTTGCGGAAGAGAGTACTCTATTTTGTGTATGGTGTCAGGAAGGCGGTTCAATATTGTCTATGGTTGGGTTTTGTTTTGATTGCTTGGCACATATTATTTGATAAGAGAATTCAGAGGGAGACTAAAAGTCACTTCCTTGAATATGTCACCAAGATCTTGGTCTGTTTCTTGGTGGGTACTTTGGTATGGTTGGTGAAAACTCTTGTGGTTAAGGTGTTGGCTTCTTCTTTCCATGTAAGCACGTACTTTGATAGGATTCAGGAGTCACTCTTTAATCAATTCGTGATTGAAACACTCTCAGGTCCACCATTGGTAGAAATTCAAAAGTCAGAGGAAGAGGAGGAAAGGCTTGCTGATGAGGTTCGAAAATTGCAAAATGCTGGAGATAATATACCCCCTGACCTTAGGGCAACTGCCTTTTCTACAAATCAGAGTAAAAATGTGACCAGGAGCGGAATGCTCCAGAAAAGTCCAAGGCTTAAAAGTGGAAAGTTTTCTCGCCCACTTTCCAACAAGGGAGACGATGGAATAACTATTGATCACTTGCATAAGCTGAACCCAAAAAATGTCTCTGCCTGGAATATGAAAAGATTAATGAATATAATCCGTCATGGGGTTCTTTCTACACTGGATGAGCAGATACTTGATAAGGCTCAAGAAGATGAAAGTTCCACACAGATCAGAAGTGAAAATGAGGCTAAAGCAGCAGCAAAGAAAATATTTGACAATGTTGCTAGGCGAGCGTCCAGGTGCATATACCAGGAGGATTTGATGCGTTTTATGAGAGAAGATGAAGCTGTAAAAGCAATGAATCTCTTTGAGGGAGCTTCTGAGTCTGGGAAAATCAGCAAATCTGCCTTGAAGAACTGGGTGGTCAATGCATTCAGAGAGAGGAGAGCACTTGCTTTGACGTTGAGTGATACCAAAACGGCAGTGAACAAACTTCATCGAATGCTCAATGCTATAGTCGCCATTGTTATACTGATTATTGCACTCTTAATATTGGAAATTGCCACAACCAAATTTCTTCTCTTTTTGAGTTCACAGCTTGTGGTGGTGGCATTTATATTTGGAAATACCTGCAAGACTGTATTTGAAGCAATCGTTTTCCTGTTTGTCATGCACCCATTTGATGTGGGGGATAGGTGTGAAATTGATGGGGTCCAGATGGTTGTAGAAGAAATGAACATATTGACAACCATATTCTTAAGATATGATAATCAGAAGATTATATTCCCCAACAGTGTTCTTGCTACTAAGTGTATAAATAATTACTACCGGAGTCCTGACATGGGAGATGCTGTTGACTTCAGCATACATATAGCTACCCCGGCTGAAAAGATTGCACTTTTGAAACACAGAATACAGAGTTTTGTTGATAACAAGAAGGAGCACTGGTATCCTTCACCTCTGATAGTCTTCAGGGACTTCGACCAACTGAACATGGTAAAAATGTCACTTTGGCCAACTCATAGAATGAATCACCAAGACATGGGAGAAAGGTTTGTCAGGAGATCCATTTTGATTGAGGAGATGGTCAAAATTTTCCGGGAGCTTGACATTCAGTACCGTCTCCTGCCTCTTGATATTAGCGTTCGAAGCATGCCTACCACTTCTGAACGGCTTCCGCCTAGTTGGGCAGCAATCACATCTTGA 2760 0.4279 MAFSLKKSFKSYGSYKNSRKTSVGEDTYITNEKLPILLDQEDHHRHHRSSPPSMSTATSSSSDRGEVIVKIEGSNPAAAQGSKIWRESSYDFWRDGKDNEKNVTSGRGANDDEESFKFRHGTEDPPSELIGKFLHKQKASGDVSLDMDLEMDEFKHDRNLLPVNESPMNNRISKDLKVSFEERELEIAHDSVRRRYNKEGQGDEEFPKPPLPPHQDGGGDGEVVRCTSNRSFERKSALLRAKTKSRLMDPPEELDRRSGRVLKSGQLFSGMLGKKGDDEEDDPFLAEDLPDEFKNSHFSLWVLLEWLSLVLIVGALTCTLSIPYLRNRNLWKLKLWKWEVMVLVLICGRLVSDWVIRIVVFFIERNFLLRKRVLYFVYGVRKAVQYCLWLGFVLIAWHILFDKRIQRETKSHFLEYVTKILVCFLVGTLVWLVKTLVVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVEIQKSEEEEERLADEVRKLQNAGDNIPPDLRATAFSTNQSKNVTRSGMLQKSPRLKSGKFSRPLSNKGDDGITIDHLHKLNPKNVSAWNMKRLMNIIRHGVLSTLDEQILDKAQEDESSTQIRSENEAKAAAKKIFDNVARRASRCIYQEDLMRFMREDEAVKAMNLFEGASESGKISKSALKNWVVNAFRERRALALTLSDTKTAVNKLHRMLNAIVAIVILIIALLILEIATTKFLLFLSSQLVVVAFIFGNTCKTVFEAIVFLFVMHPFDVGDRCEIDGVQMVVEEMNILTTIFLRYDNQKIIFPNSVLATKCINNYYRSPDMGDAVDFSIHIATPAEKIALLKHRIQSFVDNKKEHWYPSPLIVFRDFDQLNMVKMSLWPTHRMNHQDMGERFVRRSILIEEMVKIFRELDIQYRLLPLDISVRSMPTTSERLPPSWAAITS 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g00052 919 SUPERFAMILY Sm-like ribonucleoproteins 734 793 IPR010920 -
Bach7g00052 919 Gene3D - 744 793 IPR023408 -
Bach7g00052 919 MobiDBLite consensus disorder prediction 192 224 - -
Bach7g00052 919 Coils Coil 475 498 - -
Bach7g00052 919 MobiDBLite consensus disorder prediction 514 537 - -
Bach7g00052 919 PIRSF Memb_At2g17000 39 919 IPR016688 -
Bach7g00052 919 MobiDBLite consensus disorder prediction 51 65 - -
Bach7g00052 919 FunFam Predicted mechanosensitive ion channel 744 793 - -
Bach7g00052 919 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 42 914 IPR016688 -
Bach7g00052 919 MobiDBLite consensus disorder prediction 10 28 - -
Bach7g00052 919 Pfam Mechanosensitive ion channel 686 890 IPR006685 GO:0016020|GO:0055085
Bach7g00052 919 MobiDBLite consensus disorder prediction 96 127 - -
Bach7g00052 919 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g00052 Bach-Chr7 852672 856861 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g00052 61 919 Mechanosensitive Ion Channel Family AT1G78610 58.889 0.0 983
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g00052 K22048 - gmx:102665658 1271.91