Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01879 ATGGCTGCATATTCTGAGAGTATCTCATCTGCATTACCTCAGTCAACTTCACATATTCATGTGGATACTGGTCTGCTAGCTGACCATTCTATCCAGATTGCAGTATGTGATCTATGCAAAGAGGCCCTATCACCTGATAACGAGGTAACAAGTGATCTTGCACCTCTTGGTGTATGTGGGGATTGTAAATTTTTGTTACATGAAGACTTTGGGACCCACGTCCAAAGTTCTCAGAGAAGGAACAGGGGAAGATTTAGGTACAGCAGTTCTGAATCACTTGATAACTTATCAAGACAGCTTCCACATACTGTGAGGCAAAACCAAAACGCTGTATCTGTGGAAGATGATCAACTTGTTGATGGTGATACTGATGCTTGGTTATTGCAGTGTACAAGTGCCCATACTACCCCTGGTGGGTCTAGAAGATGGAGACAGGTTTTCTCTGATACCGAAAGTGATGGTTTTGATAATTGGAGTTCTTTTTATGGTGAGAACGAATCATACGATACTTTTTTAAGGTATAGGGCATCCTATGGGGAGAATGATTCTTTCTCTTTCAGTGCATATGGGGGCGAGTCAGATGTCTCTATAGATAGACATAGTTTTGTAGGTACAGGAATGTTTAATTTACCAGACGAGGGAGATGAATTTGATAGTGACACTGATATAGATCCAATGCATGCTGGACTCAGCCATTGGAACTTAGATGATGAGGAAGACGAGGGTGAAGAAGGAGAGGAGGAGGAAAGGGATTGGGATGTAGGTGAGGCTGAGGAAGCTGAAGCAACGTCCCGTCTCCAAATTTTTTTCACCTCAAGCTCAAGTGAGAACAGCGGCCCCATTAATTGGGAACAACAGATCAATTCCCCTGAATCTGAGAGGATACTTAGCCGAAGAGTTAGGGACAGCTGGCAAGCTCACAATGGTCACAGCTTCACTAACTTGGATGAGACTGATTTACCACCTTATGGTGCAAATTTTGAAGACTACCTTGATGCTAGACACTTTGAAGAGTTGCTTGAGCATCTTGCTGAGAATGACAGTTCAAGACGAGGAGCCCCACCAGCAGCTGTGTCTTTTGTGAATAGTCTGCCTCTTGTCATCGTCAGCAAGGAACATGAGCAGCGTGAAGAATTAGTATGTGCTATATGCAAGGATGGCTTAACCACTGGCACTGAAGTAAATCAGCTTCCCTGCTTACACCTTTATCACCCCTGTTGCATTTTGCCATGGTTGAGTGCACGAAATTCATGCCCCCTATGCCGATATGAACTTCCAACTGATGATAAAGATTATGAAGAGGGAAAGCGAAACAATGATGGTACAAATGAGATCCATGAAAGAGAAGCGCTAGATGTGATGGATGAGAGTTCCTCCGATATCTCTGATGGAACTGAAGCAAATGAAGAGGATGTTAGCAGTCAAAGTGGAATACAGCAGAGAGAACTCGTAGGCATGGGTCCTGTTATAAATCCTCCTACCGTTAGAGGAGGTAGAGGAAGATGGTTTTTATTTGCTGCTGCTCCAATTGTTAGTCTAGTGGGCATTGTTCTTGTCCTGTGGTTAGGTAACCCATTAACTGAAGGAAGTAGACGACTTGGCCACTGCAACTTACCCGTGCAGAACCGGCATCAAGTTTGTGTTTCTGCGTCGGCCAACCAAAGGGAGAATAGAAGTAGAAGATGGTGGTCCTTTTTCTAA 1701 0.4392 MAAYSESISSALPQSTSHIHVDTGLLADHSIQIAVCDLCKEALSPDNEVTSDLAPLGVCGDCKFLLHEDFGTHVQSSQRRNRGRFRYSSSESLDNLSRQLPHTVRQNQNAVSVEDDQLVDGDTDAWLLQCTSAHTTPGGSRRWRQVFSDTESDGFDNWSSFYGENESYDTFLRYRASYGENDSFSFSAYGGESDVSIDRHSFVGTGMFNLPDEGDEFDSDTDIDPMHAGLSHWNLDDEEDEGEEGEEEERDWDVGEAEEAEATSRLQIFFTSSSSENSGPINWEQQINSPESERILSRRVRDSWQAHNGHSFTNLDETDLPPYGANFEDYLDARHFEELLEHLAENDSSRRGAPPAAVSFVNSLPLVIVSKEHEQREELVCAICKDGLTTGTEVNQLPCLHLYHPCCILPWLSARNSCPLCRYELPTDDKDYEEGKRNNDGTNEIHEREALDVMDESSSDISDGTEANEEDVSSQSGIQQRELVGMGPVINPPTVRGGRGRWFLFAAAPIVSLVGIVLVLWLGNPLTEGSRRLGHCNLPVQNRHQVCVSASANQRENRSRRWWSFF 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01879 566 MobiDBLite consensus disorder prediction 429 455 - -
Bach6g01879 566 SUPERFAMILY RING/U-box 361 428 - -
Bach6g01879 566 MobiDBLite consensus disorder prediction 429 477 - -
Bach6g01879 566 ProSiteProfiles Zinc finger RING-type profile. 381 422 IPR001841 -
Bach6g01879 566 MobiDBLite consensus disorder prediction 226 258 - -
Bach6g01879 566 MobiDBLite consensus disorder prediction 236 256 - -
Bach6g01879 566 Pfam Ring finger domain 381 422 IPR001841 -
Bach6g01879 566 FunFam E3 ubiquitin-protein ligase RING1-like 342 428 - -
Bach6g01879 566 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 341 428 IPR013083 -
Bach6g01879 566 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 301 426 - -
Bach6g01879 566 SMART ring_2 381 421 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01879 Bach-Chr6 29961534 29963234 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01879 26 566 C3H Transcription Factor Family AT5G01980 42.959 2.24e-123 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01879 - - gmx:100797923 699.508