Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01877 ATTAACGCCTATGGAAGCGTCTGGTGCCAACCCCGACATGTTCAGAACTCCTTCTGGAACTTTTAATTCAAGAAGATATGGGATTTTGTCTGCCTCGAATATAATTCAGGCACCCTTATCGTTGTTGTTGGAGTATTCGGGTATTCTGCGAAGCAGGTCCAATCACCAAGAAAACGAGGGCTTGATCAATGATCGACTCTCTAATGGATTCCGTGACCATCTTCATAGTCGCATAGAAGAACCTTCGGCTATTTCCAATGACGGGGAGGTGTCCATTAGGATTATTGGTCCTGGTGAACGGGACATTGATAGGGAGGGCGCTGGTTTGGTGGTTGGTCAGGCCAGGGAGGCACTTTCCTTGAATGAGGCTTCCGCACAATCTTTGCCCGGGATGCCCTCTACAACACTGTCTCCTTCGGAGAGTCAGGCAGAATCAAGGACTGATCGTGTTGCAGGAGAGGGTGTTTCCCAATCCGTGAATGCAACTGCAGATACAGAAGCAGGTGATGGAGTTGGGGCTAATGGTAGGGATTCTTCTTACCAAAGATACGATATTCAGCAGGCTGCTAGGTGGATTGAGCAGGTCTTGCCTTTCTCTTTACTACTGTTGGTCGTCTTCATCCGGCAGCATTTACAAGGTTTTTTTGTCACAATTTGGATTGCTGCTGTTCTTTTCAAGTCCAATGACATTTTACGGAAACAGACGGCTCTGAAGGGAGAGAGGAAAATTCCTGTTCTAGTTGGCATTTCTATTGCATTTGCTCTTCACGTTGTTGGTGTTTATTGGTGGTATCAGAGTGATGATCTGTTGTATCCTCTGATTATGCTTCCTCCCAAAGCTATACCTCCTTTCTGGCATGCTATTTTTATGATCATGGTGAACGATACTTTAGTCCGCCAGGCAGCAATGGTGTTCAAGTGTATTTTGTTGATGTATTATAAGAATAGCAGAGGTCGAAATTATCGTAAGCAGGGGCAAATGCTGACACTGGTTGAATACTTGCTTCTGCTTTACCGTGCATTGTTGCCAACACCAGTATGGTATCGTTTCTTCTTGAACAAAGAATATGGGAGCCTCTTTTCATCACTAATGACAGGGTTGTATCTAACATTTAAGCTTACATCTGTTGTTGAAAAGGTGCAATCTTTCTTTGCTGCTGTCAAGGCATTGTCACGCAAAGAAGTACACTATGGGGTGTATGCAACATCAGAGCAGGTCCATGTGGCTGGTGATCTTTGTGCCATATGCCAGGAGAAGATGCATGCCCCTGTCTTTCTTCGTTGTAAACATATCTTCTGTGAAGACTGTGTATCAGAGTGGTTTGAGAGAGAAAGGACCTGCCCGTTGTGCAGGGCTTTGGTAAAACCTGCAGATCTCAGATCATTTGGTGATGGTTCAACCAGTCTGTTTTTTCAGTTATTTTGAAAACCACAAGACCGGGAAGTTTTTCTGCTTCGAAGCTTTATATCCATCTTCAAGGCAGGTGTCCTGATCCATCATACATCAACCCATGTAAAATTCACTGGAGGCATTAATTGGTTTACCCCCTAGAAAATCGATGCAGCTGGATAGAAATGGACTGGTCGTCTGTTGATATAATGTGCTAGTAAGGGGTCAAGTGTATCTAAATATCCATGTCATGTAGAGGAAGTTCATTTGTATACCAATTAAATGTGATACTGTTCATTTTTTGAGTAAT 1700 0.4371 MEASGANPDMFRTPSGTFNSRRYGILSASNIIQAPLSLLLEYSGILRSRSNHQENEGLINDRLSNGFRDHLHSRIEEPSAISNDGEVSIRIIGPGERDIDREGAGLVVGQAREALSLNEASAQSLPGMPSTTLSPSESQAESRTDRVAGEGVSQSVNATADTEAGDGVGANGRDSSYQRYDIQQAARWIEQVLPFSLLLLVVFIRQHLQGFFVTIWIAAVLFKSNDILRKQTALKGERKIPVLVGISIAFALHVVGVYWWYQSDDLLYPLIMLPPKAIPPFWHAIFMIMVNDTLVRQAAMVFKCILLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLMTGLYLTFKLTSVVEKVQSFFAAVKALSRKEVHYGVYATSEQVHVAGDLCAICQEKMHAPVFLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQLF 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01877 471 MobiDBLite consensus disorder prediction 120 171 - -
Bach6g01877 471 MobiDBLite consensus disorder prediction 120 161 - -
Bach6g01877 471 Pfam Zinc finger, C3HC4 type (RING finger) 408 451 - -
Bach6g01877 471 SMART ring_2 410 447 IPR001841 -
Bach6g01877 471 ProSiteProfiles Zinc finger RING-type profile. 410 448 IPR001841 -
Bach6g01877 471 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 385 458 IPR013083 -
Bach6g01877 471 CDD RING-HC_RNFT1-like 408 448 - -
Bach6g01877 471 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 19 471 IPR044235 GO:0061630|GO:1904294
Bach6g01877 471 SUPERFAMILY RING/U-box 401 453 - -
Bach6g01877 471 ProSitePatterns Zinc finger RING-type signature. 425 434 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01877 Bach-Chr6 29939139 29948238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01877 1 471 C3H Transcription Factor Family AT5G01960 68.856 0.0 642