Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01852 ATGATGCTAATGCCCTACTTTGTTACAGTACTTATCTTTTTCCTGCTGCTTTTGTTTTCCCAAACTTCAGCTGATATAAATTCAGAAAAACAAGCTCTCCTTGATTTTGTTGGTGCAGTTCATCATGGTGAAAAAGTGAATTGGGAGCATGCAACCTCAATGTGCACTTCTTGGGTGGGAATAACTTGCAGTCCAGATGGCTCTCATGTGATTGCCGTTCGGCTTCCGGCCACTGGACTGCGCGGTTGTATCCCAGTCAACACCCTTGGTACCCTGAATGGCCTCACGGCCCTCAGTCTCCGCTCTAACACTCTCGGTGGGAATCTTCCACCTGACATACTTTCCCTTCCTTCTCTCCGCTTCATATACTTGCAACACAACAACTTTTCTGGCAATATTCCGCACTTCCTCTCTCTCAGGCTCAGTGTTGTTGATCTTTCCCACAACTCTTTCAGGGGGAAAATTCCGACCTCAATTCAAAACTTGAAATATCTAACCGGATTGAAGCTCCAGAATAACTCTCTCACTGGACATATCCCTCATTTTAACCTTCCAAGGCTAAAGGATTTGAATTTGAGCTATAACCACTTGAAAGGTTCAATTCCTTCAGCCTTCAATAAGTTTTCTGAGTCTTCATTCGAAGGGAATTTGATGTTATGTGGATCACCACTGCACACACGTTGTTCAGTTTCCCTCTCTCTTTCTTCCTCCAGTAAGAAACTGAGTAAAGGGGTTATAGTTGCAATTGCATTGGGGGGTTTCTCCCTGTTCTTTCTTTTGCTTCTGATACTACTATTGTGCTGTTCCAAGAAAAACGATTTTTCTCAGGACGATGCTCTGAAAGAGAAGGATGAGAAGCTTAGGGAGGGATTCGGGAGTGGAGTGCAAGAATCTGAGAAGAACGAGATAATATTTTTTCAAGGTTGTTCTTATAGTTTTGATCTTGAGGATCTGTTAAGGGCTTCTGCTGAGGTGCTTGGGAAGGGAGGTTGTGGGACAACTTTCAAGGCCACATTGGAGGATGGGACTACAGTGGCTGTGAAGAGGTTAAAAGAAGTGTTGGTAGGGAAGAAAGAATTTGAACATCAAATGGAGACTGTGCATTGGATTGGTCAGCACCCAAACATTATTCCTCTTCGTGCTTACTACTATTCCAAGGAAGAAAAGTTAATGGTTTACGACTACATATTTGCTGGAAGCTTTGCCAGTTTATTGCATGGAAGCAGGGGAAGTGGCAGAACTCCGCTAGATTGGGAATCCAGACTGGAGATATCACTTGGAGCTGCTACAGGAATTGCCCATATCCACACTGTCAGTGGAAGGAAACTTGTCCATGGCAATATTAAGTCCTCTAATATCCTTCTCAGAGTAAACCTTCAAGGCTGCATATCAGATTTTGGCTTAACTCCTCTAATCACTACCTCAGTCCACAATACAGGTCCAGGCTACCAAGCACCCGAGGTTATCGAAGGCCAAAGATGCACCCAAAAATCTGATATATATAGCTTTGGTGTTGTCCTTCTTGAGATGCTGACTGGCAAACCACCAATTCAGTATTCAGGGCATGATGACGTGGTTCATCTTCCAAGATGGGTGCAATCTGTTGTTAGGGAGGAATGGACTGCTGAAGTGTTTGATGTTGAGTTAATGAGGTATCAAAATATTGAAGAAGAATTGGTGCAAATGCTGCAACTGGCAATGGCTTGTGTTGCAAAAGCACCTGACACGAGACCTTCAATGGAGGAAGTCGTTAAGATGATTGAAGATATCAGAGAATACAAATTCTGA 1788 0.434 MMLMPYFVTVLIFFLLLLFSQTSADINSEKQALLDFVGAVHHGEKVNWEHATSMCTSWVGITCSPDGSHVIAVRLPATGLRGCIPVNTLGTLNGLTALSLRSNTLGGNLPPDILSLPSLRFIYLQHNNFSGNIPHFLSLRLSVVDLSHNSFRGKIPTSIQNLKYLTGLKLQNNSLTGHIPHFNLPRLKDLNLSYNHLKGSIPSAFNKFSESSFEGNLMLCGSPLHTRCSVSLSLSSSSKKLSKGVIVAIALGGFSLFFLLLLILLLCCSKKNDFSQDDALKEKDEKLREGFGSGVQESEKNEIIFFQGCSYSFDLEDLLRASAEVLGKGGCGTTFKATLEDGTTVAVKRLKEVLVGKKEFEHQMETVHWIGQHPNIIPLRAYYYSKEEKLMVYDYIFAGSFASLLHGSRGSGRTPLDWESRLEISLGAATGIAHIHTVSGRKLVHGNIKSSNILLRVNLQGCISDFGLTPLITTSVHNTGPGYQAPEVIEGQRCTQKSDIYSFGVVLLEMLTGKPPIQYSGHDDVVHLPRWVQSVVREEWTAEVFDVELMRYQNIEEELVQMLQLAMACVAKAPDTRPSMEEVVKMIEDIREYKF 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01852 595 Gene3D Transferase(Phosphotransferase) domain 1 398 594 - -
Bach6g01852 595 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Bach6g01852 595 Gene3D Phosphorylase Kinase; domain 1 288 395 - -
Bach6g01852 595 ProSiteProfiles Protein kinase domain profile. 320 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach6g01852 595 Pfam Protein kinase domain 323 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach6g01852 595 FunFam Probable inactive receptor kinase RLK902 26 183 - -
Bach6g01852 595 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 396 594 - -
Bach6g01852 595 Gene3D Ribonuclease Inhibitor 25 181 IPR032675 -
Bach6g01852 595 FunFam pollen receptor-like kinase 1 267 395 - -
Bach6g01852 595 PANTHER OS05G0588300 PROTEIN 4 591 - -
Bach6g01852 595 SUPERFAMILY Protein kinase-like (PK-like) 324 587 IPR011009 -
Bach6g01852 595 SUPERFAMILY L domain-like 44 216 - -
Bach6g01852 595 Gene3D Ribonuclease Inhibitor 182 228 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01852 Bach-Chr6 29572423 29574663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01852 6 591 Receptor kinase-like Gene Family AT5G58300 57.705 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bach6g01852 Pkinase 5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01852 - - var:108321341 786.178