Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01842 CCCGGGGCAACGATAGAGAGAGGATGGAAAATTTGGGTTTAGATCGTAGAAAGGCAGTCGAAGAGCTTATGAGAGGACATGAATTTGCGAGCCAGCTTCGAGAATTAATGAATAAATCCAGTAAAGAATCTGGTGGTTGTGGTGGTGTTGATGGAGATGATTTTGCAGTGACTATTCCATTTGCTGAAGATCTTCTGGGGAAGGTGCTGAGATCATTCACTAATACCCTTTTGCTTCTCAATAGCAAAAAAAATGAATCCGAGGAAGTGTCTCAACTGCAAATCAGAGATTCCTCTTCTTGGAAACCCACCAAGTCTGAGGATTCTCAAGAGAGCTGCAAGAGTTCTTCCATACTTAAAGAACGAAGAGGCTGTTACAAGAGAAGAAGAACAACTTCACAAACATGGGAAAAAGAGTCTGAAGCTCCAATTGAAGATGGCCACCAATGGAGAAAATATGGACAAAAAGTAATACTCCATGCCATACACCCCAGGAACTACTACAGATGCACTCATAAATTTGATCAAGGTTGCCAAGCAACAAAACAGGTGCAGAAAATTCAAGACGAGCCTCCTCTGTTCAAGACCACCTACTATGGGACCCATACTTGCAGAAACTTGCTAGATCCAGAAATGATTCTGGACTATGGTTGTGGTTCAGAGCATATAATCAGTTTTGACAACAAAGACATCCCAACCAAACAAGACCTATCTCCCTTCTTCTCAACTTCTTCCTTAGTAAAGCAAGAGTGCAAGGAGGAAGGGATTCAAAACCACCACTTGGATCATCATCAATACCAATCACCATTGTCTCACGACGATTACCTTATCCCAGATGAACTCACTTTTGATTCCCCAGGCTGCTGCAGGCATCTCTCATTGTCATCAACACTTGAATCAACTCACAGTGATGTAATCTCTGAGGTCTTGTGTGATTCTGTTGAGCTTGATTCTTTCGAGCCCTTCGAATTTTGATGAATTGGTTTAATTAGTGGGTGGGTTATGTTAAGTTTTGTAGA 1018 0.4185 MENLGLDRRKAVEELMRGHEFASQLRELMNKSSKESGGCGGVDGDDFAVTIPFAEDLLGKVLRSFTNTLLLLNSKKNESEEVSQLQIRDSSSWKPTKSEDSQESCKSSSILKERRGCYKRRRTTSQTWEKESEAPIEDGHQWRKYGQKVILHAIHPRNYYRCTHKFDQGCQATKQVQKIQDEPPLFKTTYYGTHTCRNLLDPEMILDYGCGSEHIISFDNKDIPTKQDLSPFFSTSSLVKQECKEEGIQNHHLDHHQYQSPLSHDDYLIPDELTFDSPGCCRHLSLSSTLESTHSDVISEVLCDSVELDSFEPFEF 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01842 316 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 14 221 IPR044810 GO:0003700
Bach6g01842 316 MobiDBLite consensus disorder prediction 93 108 - -
Bach6g01842 316 ProSiteProfiles WRKY domain profile. 131 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach6g01842 316 Pfam WRKY DNA -binding domain 137 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach6g01842 316 SMART WRKY_cls 136 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach6g01842 316 MobiDBLite consensus disorder prediction 86 108 - -
Bach6g01842 316 Gene3D WRKY domain 120 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bach6g01842 316 SUPERFAMILY WRKY DNA-binding domain 134 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01842 Bach-Chr6 29482913 29484678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01842 1 196 WRKY Transcription Factor Family AT3G56400 39.196 1.26e-36 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bach6g01842 WRKY 9.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01842 - - gmx:100170682 274.248