Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01829 ATGATTCATGCGATGCAATCCATCATGGCTAATATGCATCGCCGTCTACTTGACAAGGAGCTAAGCATTGCACCCGCGGCAGATAGAAACAACACGGGTGATTCATTCATAAGCGCATCCAGCTTTGACACAAACATGGTGATAATTTTGGCAGTTCTTTTGTGTGCATTAATATGTGCTCTTGGGTTGAACTCAATTGTGCGCTTTGCTCTGAGTTGTAGACGTAGATTTTCCAGTGAGACACCACATCAAACAGCTGCTAGGCTTGCCACCAAGGGCCTAAAGAAGAGAGATTTGAGTCAGATTCCGGTGGCAGTGTATGGATCAGGCGTGAATATTCCGGCGACGGAGTGCCCGATTTGTCTTGGTGAGTTCGAGAAGGGAGACAAGGTGCGAATGCTGCCAAAATGCAATCACGGGTTCCATGTGAGGTGCATAGACACATGGCTGGTGTCACATTCTTCTTGCCCAAATTGTCGCCATTCATTGCTTGACCAGCCAGCAAATTCGAATGGTAATCAGGAGGCGGCCAGAAGTCGGTCGTCGGAAGATGGGTCTGGCCGACAAGGTGGCGATATTGTGGTGAACACCGGAGGAAGTTGA 603 0.4876 MIHAMQSIMANMHRRLLDKELSIAPAADRNNTGDSFISASSFDTNMVIILAVLLCALICALGLNSIVRFALSCRRRFSSETPHQTAARLATKGLKKRDLSQIPVAVYGSGVNIPATECPICLGEFEKGDKVRMLPKCNHGFHVRCIDTWLVSHSSCPNCRHSLLDQPANSNGNQEAARSRSSEDGSGRQGGDIVVNTGGS 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01829 200 SMART ring_2 118 159 IPR001841 -
Bach6g01829 200 MobiDBLite consensus disorder prediction 167 200 - -
Bach6g01829 200 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 165 IPR013083 -
Bach6g01829 200 Pfam Ring finger domain 117 160 IPR001841 -
Bach6g01829 200 SUPERFAMILY RING/U-box 102 167 - -
Bach6g01829 200 PANTHER RING-H2 FINGER PROTEIN ATL78 13 181 IPR044602 GO:0016567|GO:0016740
Bach6g01829 200 CDD RING-H2_EL5-like 117 160 - -
Bach6g01829 200 MobiDBLite consensus disorder prediction 167 186 - -
Bach6g01829 200 ProSiteProfiles Zinc finger RING-type profile. 118 160 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01829 Bach-Chr6 29383462 29384064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01829 12 184 C3H Transcription Factor Family AT3G10910 55.738 1.27e-55 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01829 - K19040 cave:132192047 252.292