Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01827 ATGTTTTTACATGCAGAAGGAGCATGTGGATATGGGAACTTGCAGAGCCAGGGCTATGGAACCAACACTGCAGCTTTAAGCTCAGCTCTTTTCAACAACGGCTTGAGTTGCGGAGCATGCTACGAGCTGCGTTGCTGTAATGACCCTCAATGGTGCCTCCCGAGCACCATTACTGTCACTGCAACCAATTTTTGCCCACCTAATCTTGCTCTACCAAATGATAATGGTGGCTGGTGGAATCCCCCTCTACAACATTTTGATTTGGCAGTGCCTGCTTTCACCCAAATTGCAAAATATCGTGCTGGGATTATCCCTGTACTCTTCAAAAGAGTGCCATGTGTGAAGAAAGGTGGAATAAGGTTCACCATAAGTGGGCATTCATACTTCAATCTGGTTCTAATAACAAATGTGGGAGGAGCAGGAGATGTTATAGCAGTGTCCATAAAGGGGTCGAGAACAGGGTGGGAAAGCATGTCCAGAAACTGGGGCCAGAATTGGCAGAGCAACACATACCTCAATGGACAGAGCCTATCTTTCAGGGTCACCAGCAGTGATGGCCAAAGAGTTACCAGTTACAATGTAGTGCCTGCTGGTTGGCAATTTGGACAGACCTTTGAGGGTGTCCAATTCTGA 633 0.4708 MFLHAEGACGYGNLQSQGYGTNTAALSSALFNNGLSCGACYELRCCNDPQWCLPSTITVTATNFCPPNLALPNDNGGWWNPPLQHFDLAVPAFTQIAKYRAGIIPVLFKRVPCVKKGGIRFTISGHSYFNLVLITNVGGAGDVIAVSIKGSRTGWESMSRNWGQNWQSNTYLNGQSLSFRVTSSDGQRVTSYNVVPAGWQFGQTFEGVQF 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01827 210 Pfam Lytic transglycolase 23 107 IPR009009 -
Bach6g01827 210 Gene3D - 3 113 IPR036908 -
Bach6g01827 210 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 128 207 IPR007117 -
Bach6g01827 210 PANTHER EXPANSIN-A15 6 209 IPR002963 GO:0009664
Bach6g01827 210 Gene3D - 117 210 IPR036749 -
Bach6g01827 210 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 6 118 IPR007112 -
Bach6g01827 210 PRINTS Expansin/Lol pI family signature 155 169 IPR007118 GO:0005576
Bach6g01827 210 PRINTS Expansin/Lol pI family signature 27 45 IPR007118 GO:0005576
Bach6g01827 210 PRINTS Expansin/Lol pI family signature 5 23 IPR007118 GO:0005576
Bach6g01827 210 PRINTS Expansin/Lol pI family signature 193 207 IPR007118 GO:0005576
Bach6g01827 210 PRINTS Expansin/Lol pI family signature 101 117 IPR007118 GO:0005576
Bach6g01827 210 SUPERFAMILY Barwin-like endoglucanases 6 136 IPR036908 -
Bach6g01827 210 FunFam Expansin 118 210 - -
Bach6g01827 210 Pfam Expansin C-terminal domain 119 196 IPR007117 -
Bach6g01827 210 SMART dpbb_1 23 108 IPR007112 -
Bach6g01827 210 SUPERFAMILY PHL pollen allergen 115 207 IPR036749 -
Bach6g01827 210 PRINTS Expansin signature 18 32 IPR002963 GO:0009664
Bach6g01827 210 PRINTS Expansin signature 129 150 IPR002963 GO:0009664
Bach6g01827 210 PRINTS Expansin signature 117 129 IPR002963 GO:0009664
Bach6g01827 210 PRINTS Expansin signature 76 93 IPR002963 GO:0009664
Bach6g01827 210 PRINTS Expansin signature 193 209 IPR002963 GO:0009664
Bach6g01827 210 PRINTS Expansin signature 45 56 IPR002963 GO:0009664
Bach6g01827 210 PRINTS Expansin signature 57 67 IPR002963 GO:0009664
Bach6g01827 210 PRINTS Expansin signature 93 106 IPR002963 GO:0009664
Bach6g01827 210 PRINTS Expansin signature 164 185 IPR002963 GO:0009664
Bach6g01827 210 CDD DPBB_EXPA_N 6 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01827 Bach-Chr6 29362410 29363260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01827 7 210 Expansin Gene Family AT2G40610 77.561 1.34e-118 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01827 - K20628 jre:109002421 382.104