LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach6g01741	CCGATTCTGAGTAGAGGCAGCCATGGTTACAGCATATGGAGAGCACCTTCCTGCAGTCCCTAGTTGGCTAAACAAAGGAGACAATGCATGGCAAATGACAGCAGCAACCCTTGTGGGTCTCCAGAGTATGCCAGGGCTTGTGATTTTGTATGCCAGCATAGTCAAGAAGAAATGGGCTGTGAACTCTGCTTTCATGGCTCTCTATGCATTTGCTGCAGTCCTTATCTGCTGGGTTCTGTTGTGCTACCGTATGGCCTTTGGAGACGAGCTCCTCCCCTTCTGGGGCAAGGGGGCACCAGCTCTAGGCCAAAAGTTTCTTATAAACCAAGCCAAAGTCCCTGAAAGCACCCATCTCTTCAACAATGGCACTGTAGAAAGCTCAACCACAGAGCCCTTTTATCCCATGGCTACCCTTGTCTACTTCCAATTCACTTTTGCTGCAATTACCATGATTCTATTGGCTGGGTCTGTCCTTGGCAGAATGAACATCAAGGCCTGGATGGCTTTTGTCCCTCTTTGGCTCATTTTCTCATACACCGTGGGTGCATTCAGTCTCTGGGGCGGTGGGTTTCTTTATCAATGGGGTGTCATAGATTACTCCGGCGGCTATGTCATCCACCTCTCCTCCGGCATCGCTGGATTCACCGCCGCCTACTGGGTGGGGCCGAGGCTGAAGAGTGATAGGGAGAGATTCCCACCAAACAACGTGCTGCTGATGCTTGCGGGTGCTGGGTTGCTATGGATGGGGTGGTCAGGGTTCAATGGTGGAGCACCATATGCGGCTAACCTTGCTTCCTCAATTGCTGTGTTGAATACAAATATATGTGCAGCTACCAGCTTGCTTGTGTGGACTTGTCTCGATGTTATCTTCTTCGGCAAACCCTCCGTCATCGGAGCTGTTCAGGGTATGATGACCGGATTGGTTTGCATCACTCCGGGAGCAGGATTGGTACAATCATGGGCGGCTATAGTAATGGGAATACTCTCAGGCAGCCTTCCCTGGGTTTCAATGATGGTTCTTCACAAGAAGTCAGCTTTGCTACAGAAGGTGGATGATACCCTAGGTGTATTTCACACACACGCAGTGGCTGGCCTTTTGGGTGGTCTCCTCACTGGTCTGTTTGCAGAGCCAGCCCTCTGCAGACTCATATTGCCAGTGACCAACTCAAGAGGAGCATTCTATGGAGGAAGTGGTGGTGGGCAGTTCTTGAAGCAGTTAGTGGCTGCACTGTTTGTAATTGGATGGAACTTAGTCTCAACCACACTCATTCTTCTTTTCATACAATTGTTTATACCGCTGAGAATGCCGGACGAGCAGTTGATTATCGGCGACGACGCCGTCCACGGCGAAGAGGCTTATGCTCTCTGGGGTGATGGAGAAAAATACGATCCAACTAAGCATGGAGCTCAGTTATTTGCAGATGAAGCTGTAACATCACCTTATGTTAATGGCGCAAGAGGTGTTACCGTAAATTTATGATTTTTTTTTTTTTGTTTTTTTGCTTCACTTGTTTGAAATGTGTGATATTGGTATGTAGTTTGC	1543	0.4874	MVTAYGEHLPAVPSWLNKGDNAWQMTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLICWVLLCYRMAFGDELLPFWGKGAPALGQKFLINQAKVPESTHLFNNGTVESSTTEPFYPMATLVYFQFTFAAITMILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFSLWGGGFLYQWGVIDYSGGYVIHLSSGIAGFTAAYWVGPRLKSDRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAANLASSIAVLNTNICAATSLLVWTCLDVIFFGKPSVIGAVQGMMTGLVCITPGAGLVQSWAAIVMGILSGSLPWVSMMVLHKKSALLQKVDDTLGVFHTHAVAGLLGGLLTGLFAEPALCRLILPVTNSRGAFYGGSGGGQFLKQLVAALFVIGWNLVSTTLILLFIQLFIPLRMPDEQLIIGDDAVHGEEAYALWGDGEKYDPTKHGAQLFADEAVTSPYVNGARGVTVNL	485

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach6g01741	485	FunFam	Ammonium transporter	4	449	-	-
	Bach6g01741	485	SUPERFAMILY	Ammonium transporter	15	428	-	-
	Bach6g01741	485	ProSitePatterns	Ammonium transporters signature.	191	216	IPR018047	GO:0008519\|GO:0016020\|GO:0072488
	Bach6g01741	485	Pfam	Ammonium Transporter Family	22	446	IPR024041	GO:0008519\|GO:0016020\|GO:0072488
	Bach6g01741	485	NCBIfam	ammonium transporter	20	446	IPR001905	GO:0008519\|GO:0016020\|GO:0072488
	Bach6g01741	485	PANTHER	AMMONIUM TRANSPORTER MEP2	10	456	IPR001905	GO:0008519\|GO:0016020\|GO:0072488
	Bach6g01741	485	Gene3D	Ammonium transporter AmtB like domains	3	449	IPR029020	-
	Bach6g01741	485	PRINTS	Rhesus blood group protein signature	261	283	IPR002229	GO:0005886
	Bach6g01741	485	PRINTS	Rhesus blood group protein signature	230	248	IPR002229	GO:0005886
	Bach6g01741	485	PRINTS	Rhesus blood group protein signature	135	151	IPR002229	GO:0005886
	Bach6g01741	485	PRINTS	Rhesus blood group protein signature	316	334	IPR002229	GO:0005886

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach6g01741	Bach-Chr6	27726544	27730269	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach6g01741	128	485	Inorganic Solute Cotransporters	AT2G38290	78.830	0.0	562

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach6g01741	K03320		-	qsa:O6P43_016565	865.144