Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01709 TAACTTTCTGTCCTTCTTTGCTTCCATTCTCTCTAGAATGGCAGAGCCACACCCCAATGCTACTCCTTCTTCTTCGTCGTCATCTTCTTCCGCTGTCAACAGGGATTCTTCAGCTGCTGCGTCGTCTTCTTTGACCTCTTCAGAAGTTCGCCAAGAGGAAAATATAACTGAGCATGCTCAAATTCAATCTTCCGGCCTAGAATCCCAGCTTTGGGCCCTCAACTTTCGAGGAATCAATTGGGGTCTTGGTGATGCAGCTGCCGTGGTTAGGGATGATACCTGGTCTTGCGTTGTTGTCCTGCTCACCTTTTGGTTTTTTGTGTCTATGACTATGATACTTGGGGTTTATGGGTCTGTGAGCCTACTGCTTGGCCCAAATTCTTCTATTCTTCTCCAACCTAATTCTATATTTGTGCAATATCTGAAGGTAGAAAACTTGAATGACTCCCAATCAGGAGTTATGCTCTATGGTACATATGGAACCCCAGCGCTCGATGTGATTACTAGTTGGGAAGAAACTCGTAATGTATCTATTGCGTATGATTCACATAAGGAATGGGAATATTACCTGAATAGAGGTTCTCAAATAAATATTTCATATCGCTTAAGCTCTGACAGTTCTTCTATTTTCCTTGTAATTGCACAAGGAAGTGAAGACCTCACTCAGTGGCTTGAGGACCCAACATATCCTAATTCCACTTTCTCATGGAATATCATCCATGGAACTGGTATGATTACACAAGACATATACAGTGCGTCAAACTATTATGTGGCAGTGGGTAATTTGAATGAGGATGCGGAGGTGGAATTAAATGTCAGAATAAGGGCCTTCTTGTATAATACAAGCAATGCCTACTATGAATGTGCTTTGACTGGCAACACATGCGGCTTGAGTATTTTCTTTCCTTCTGGAAATACAGCTGTCTTAACTACTGGTCCAGAACAGAATACATCCAGAGTCAAACTATCCTACGGACCAAGATGGCTCACATATATTATTGGCATTGTTGGAATGACTCTGCTTATGTCGTGGGCCTTCAACTGCTTGAACAAGTTTCAGTTTGCCCATGAAGATAGACCACCTGTTGTACATGAGGAAGCAGGATCTCAGAGAATCCCTCTTCTTTCTCGTAAAGATGATGATCTTTCAAGTTTGGGTTCATCGTATGACTCCCTGTCACATGATGAGGAGGATTTTGACTTACAGACTGGAGGTTCCATGGAAGGAAAACCTTTAGGTGATGGCGAAACCCGTAACAATACCCGGCGCCTTTGTGCAATTTGTTTTGATGCTCCAAGGGACTGCTTCTTCCTTCCATGTGGGCATTGTGTGACTTGTTTTGAATGTGCAACTAGGATAGTAGAGGCAGATGGTACTTGCCCTGTTTGTCGCAAGAACATGAAGAAGATTAGGAAGATTTTTACTGTTTAAGCAGTGTACTGCTTGTGGCACTGACTAAATGAATGAGCAGAACTGTAGATGAGTTTGTATGTAGATCATTGTTTTCCCAGCAATCATTAGCAATTACCAAGTTAATGATTGCTGGTGATGAGGATAATATCAGCCATTTGCTGAAAAAGAAAAGAAGGGAGAGGATGGTGTTAAGGTTTTG 1613 0.4222 MAEPHPNATPSSSSSSSSAVNRDSSAAASSSLTSSEVRQEENITEHAQIQSSGLESQLWALNFRGINWGLGDAAAVVRDDTWSCVVVLLTFWFFVSMTMILGVYGSVSLLLGPNSSILLQPNSIFVQYLKVENLNDSQSGVMLYGTYGTPALDVITSWEETRNVSIAYDSHKEWEYYLNRGSQINISYRLSSDSSSIFLVIAQGSEDLTQWLEDPTYPNSTFSWNIIHGTGMITQDIYSASNYYVAVGNLNEDAEVELNVRIRAFLYNTSNAYYECALTGNTCGLSIFFPSGNTAVLTTGPEQNTSRVKLSYGPRWLTYIIGIVGMTLLMSWAFNCLNKFQFAHEDRPPVVHEEAGSQRIPLLSRKDDDLSSLGSSYDSLSHDEEDFDLQTGGSMEGKPLGDGETRNNTRRLCAICFDAPRDCFFLPCGHCVTCFECATRIVEADGTCPVCRKNMKKIRKIFTV 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01709 464 FunFam E3 ubiquitin-protein ligase APD2 402 463 - -
Bach6g01709 464 MobiDBLite consensus disorder prediction 367 404 - -
Bach6g01709 464 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 394 463 IPR013083 -
Bach6g01709 464 ProSiteProfiles Zinc finger RING-type profile. 413 452 IPR001841 -
Bach6g01709 464 PANTHER OS05G0521000 PROTEIN 72 464 - -
Bach6g01709 464 SMART ring_2 413 451 IPR001841 -
Bach6g01709 464 Pfam Domain of unknown function (DUF4792) 141 208 IPR032008 -
Bach6g01709 464 SUPERFAMILY RING/U-box 412 458 - -
Bach6g01709 464 Pfam Zinc finger, C3HC4 type (RING finger) 410 457 - -
Bach6g01709 464 MobiDBLite consensus disorder prediction 1 46 - -
Bach6g01709 464 Pfam Domain of unknown function (DUF4793) 232 331 IPR032010 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01709 Bach-Chr6 26789029 26794571 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01709 392 461 C3H Transcription Factor Family AT3G06140 30.000 7.91e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01709 - - qsa:O6P43_026225 562.762