Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01682 GCCATCTCAACTAAACAGTCAAGGGCTTGGCAACCTTCATCTGCTTCAAAGGAGAAAATATAGCTTTTCAACGTTTTTACACTGGCAGCATTTTGAAGATTCAGGTATTTTGGTTTGAAGAACAAATGTCGTTAGAAGATTTGGACGCAGCCTAGGAGACTGGAATTGAGCCTATAGCAATGATTGTCAATTGCTTTGGTGCCTTGAATTGGTGTAAAAGGAGGAAAAATTCCCCAGCCCAGTTTCAAGAACAAGGAAAGTACAATGGGTCTGAAGTAATTGCTACTACAACTTTTAGTTATAGTTCCTTGAGATCAGCAACAGGAGATTTCCATCCATCGAGTAGAATTGGTGGTGGAGGTTATGGAGTTGTCTACAAGGGAGTTCTGAGGGACGGTACGCCAGTAGCTATCAAATCTCTTTCTGTAGAATCTAAACAAGGAACACATGAATTCATGACAGAAATTGACATGTTATCAAATATACAACATCCAAATCTTGTACAACTAATTGGCTGCTGTGTTGAGGGCAACCATAGAATATTGGTGTATGAGTACTTGGAGAACAATAGCCTTGCAAGTACTCTGCTTGGTTCCAAAACTAAACACGTTGCTTTAGACTGGCCAAAGAGGGCTGCTATTTGCTGCGGTACAGCTTCTGGCCTAGCATTTCTTCATGAAGAGATTGTACCAAATATTGTGCATAGAGATATCAAGGCCAGCAACATTCTGCTTGATGGAAACTTTCATCCTAAAATAGGGGATTTTGGCCTGGCAAAACTTTTTCCTGACAATGTCACTCATGTTAGTACTCGAGTGGCGGGAACTGTGGGATATCTTGCCCCAGAATATGCTGTTCTAGGACAACTTACAAAGAAAGCAGATGTGTATAGTTTTGGGATTCTCGTACTTGAAATAATCAGTGGTAAAAGTAGTAGCAAAGTTGCCTTTGGAGATAATCTGTTCCTTCTAGTGGAATGGGTATGGAAACTGAAAGAAGAAAATAAACTTCTGGAAATTGTTGATCCAGAACTAACTGATTATGATGAGTCTGAGGTGTTGCGATACATTATGGTTGCTCTATGTTGTACACAAGCAGCGGCACAGCAAAGGCCCTCCATGAAGCAAGTGGTTGAAATGCTTACCAAGGATGTACATATTAACGAGCCGTCTTCTCATGCATGCAAGCCCAAAAATTCTGAAAATCCCTACCTAAGCTCAATCCAATATAGTTTTGATGATATTATAACAGAGATGGTTCCCAGGTGAATGATAGTTACATTTATGCAGGGTTCATATCTTTAGGCTACTTGATGAATTAGAATGCTAGGGTCCAGAAACTTAACATTCTCTTTTTTTTTTTTGCCATCTATCATTTATTTTAGTTGTTGGGATGCCATAATTCTCTGCCAATCCTGCGGAAAGAAATAAAAGGGTGTTAAGAGAGGCCTTTTTTTTTATCAGCATGTACATAGGCATGCCTTGTGGTTTTCATGCAAAATCATTAGGCCTAAAATTTGAAATTCATAGGCCAAA 1535 0.3948 MIVNCFGALNWCKRRKNSPAQFQEQGKYNGSEVIATTTFSYSSLRSATGDFHPSSRIGGGGYGVVYKGVLRDGTPVAIKSLSVESKQGTHEFMTEIDMLSNIQHPNLVQLIGCCVEGNHRILVYEYLENNSLASTLLGSKTKHVALDWPKRAAICCGTASGLAFLHEEIVPNIVHRDIKASNILLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTVGYLAPEYAVLGQLTKKADVYSFGILVLEIISGKSSSKVAFGDNLFLLVEWVWKLKEENKLLEIVDPELTDYDESEVLRYIMVALCCTQAAAQQRPSMKQVVEMLTKDVHINEPSSHACKPKNSENPYLSSIQYSFDDIITEMVPR 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01682 362 FunFam Putative LRR receptor-like serine/threonine-protein kinase 127 333 - -
Bach6g01682 362 CDD STKc_IRAK 70 323 - -
Bach6g01682 362 Gene3D Transferase(Phosphotransferase) domain 1 127 335 - -
Bach6g01682 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Bach6g01682 362 Pfam Protein tyrosine and serine/threonine kinase 55 321 IPR001245 GO:0004672|GO:0006468
Bach6g01682 362 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 36 333 - -
Bach6g01682 362 ProSiteProfiles Protein kinase domain profile. 51 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach6g01682 362 FunFam cold-responsive protein kinase 1 21 126 - -
Bach6g01682 362 ProSitePatterns Protein kinases ATP-binding region signature. 57 79 IPR017441 GO:0005524
Bach6g01682 362 SMART serkin_6 51 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach6g01682 362 SUPERFAMILY Protein kinase-like (PK-like) 33 321 IPR011009 -
Bach6g01682 362 Gene3D Phosphorylase Kinase; domain 1 13 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01682 Bach-Chr6 25631366 25635549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01682 5 321 Receptor kinase-like Gene Family AT1G53420 51.887 2.65e-106 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bach6g01682 PK_Tyr_Ser-Thr 1.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01682 - - gmx:100816683 530.406