Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01616 ATGACAATGGCGTCTCCGCCTCCTCTAACGCTAAACGTCGTCGGATCAGACGAGTTTCCTGATACTATTGCTGGTTCTAGTTCGGGTACTAGCTCGTCGTCGTTTCTGAGCAAGTTGAATCCTAGCATTCTTATAATCGTCATAGTCCTTGCTGTTACCGTGATTGTATCATTAGCTCTGTGTTTCCTTGTTCGCCACCTCAACCGCCGTTGCCTCCGCCGGCTTTCCCCTTCCTCCGCCACAATTTCTACAACTGCGACGCCTATTTTCACCTCAAGCCGGCGTATATCACCGGAAATCCCTCCGTCTTCCGTTATTGATTCCCTCCCTTTGTTTACTTTTTCTTCCATTAATCGCCGATCCTCCGCCACCTCCGCCGGCGACTGCGCTGTTTGCCTCTCTAAATTCGAGCAAAACGACCTCCTCCGCCTGCTTCCTCTATGTTGTCATGCCTTCCATGCCGAATGTATTGACACGTGGCTTCAGTCGAACCTCACCTGCCCGCTCTGCCGAACGGCCATTTTCTCCACTGAATCGGACCTCGCGAAGATTCTGCAATCTTCTTCCACCGCCGCCGGTGGAAGCTTCCGACTAGAGATTGGGAACATCAGTCGCCGTGGAACGGAGTCGAACTCCGCCGAAGAAGTGAGGGCAGGGTCGAGGTCAAGGTCAAGGTCCTATTCGATAGGATCGTTTGAGTATTTTGTAGACGAAGATTCTGAGGTTCCGTTAAGCCACGCGCATCGGCGGAGCGTGTCTGATGTTAAGGACGACTCAGCGGCGCGAGATACTCAGCCAGCTCAGCCGGTTAACGAGGAGAATTTAGCCGCTGATGTAGGCAATGGAAGGAACTGGCTGAAGGACTATGTTGATAGGCTCTCGGCTTCAATATCATCAAGAACTATGTCGTTTCGAAGCTCTGGAAGGTTCTTTACCGGGAGTAGTCGACAAAGCGACGCCGTTTCCGCCACTGCCGGAGATTATGACGTGGAAGGCCATCGACTAGGGGAGGAGATCAGCGAAATGTTTCGTTGGCTCTCAGGGGTATAA 1050 0.5229 MTMASPPPLTLNVVGSDEFPDTIAGSSSGTSSSSFLSKLNPSILIIVIVLAVTVIVSLALCFLVRHLNRRCLRRLSPSSATISTTATPIFTSSRRISPEIPPSSVIDSLPLFTFSSINRRSSATSAGDCAVCLSKFEQNDLLRLLPLCCHAFHAECIDTWLQSNLTCPLCRTAIFSTESDLAKILQSSSTAAGGSFRLEIGNISRRGTESNSAEEVRAGSRSRSRSYSIGSFEYFVDEDSEVPLSHAHRRSVSDVKDDSAARDTQPAQPVNEENLAADVGNGRNWLKDYVDRLSASISSRTMSFRSSGRFFTGSSRQSDAVSATAGDYDVEGHRLGEEISEMFRWLSGV 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01616 349 CDD RING-H2_EL5-like 128 171 - -
Bach6g01616 349 SUPERFAMILY RING/U-box 105 177 - -
Bach6g01616 349 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 102 180 IPR013083 -
Bach6g01616 349 ProSiteProfiles Zinc finger RING-type profile. 129 171 IPR001841 -
Bach6g01616 349 MobiDBLite consensus disorder prediction 247 273 - -
Bach6g01616 349 FunFam E3 ubiquitin-protein ligase ATL6 91 177 - -
Bach6g01616 349 MobiDBLite consensus disorder prediction 247 261 - -
Bach6g01616 349 Pfam Ring finger domain 128 171 IPR001841 -
Bach6g01616 349 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 34 256 - -
Bach6g01616 349 SMART ring_2 129 170 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01616 Bach-Chr6 23731512 23732561 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01616 104 184 C3H Transcription Factor Family AT3G18930 50.000 2.87e-21 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01616 K10663 - qsa:O6P43_026856 396.356