Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01611 ATGGGAATTGCAGCAAACTCATCATCTTCTACCATGAGCCTAGGCCATGGCCATAGCCAAGACGACACCACGGCCACCACCTCCGCCACCAACAACCATAACAAGGCAGCCGACCATCACGACCACGACATGGTCATGCCAGGTTTTCGCTTCCATCCAACCGAAGAAGAGCTCGTGGAGTTCTACCTTCGCCGTAAGGTGGAGGGAAAGAGCTTCAACGTTGAACTTATCACTTTCCTTGATCTTTATAGCTATGACCCTTGGGAACTTCCTGCAATGGCTGCAATTGGTGAGAAGGAGTGGTTCTTTTATGTGCCTAGAGATAGGAAGTATCGGAATGGTGATCGTCCTAACCGAGTGACTCCTTCTGGGTACTGGAAGGCGACCGGAGCTGATAGAATGATCAAAACAGAACATTTTCGGTCGATTGGGTTGAAGAAAACCCTAGTTTTCTATTTTGGGAAAGCTCCGAAAGGCATCCGAACTAGTTGGATTATGAATGAGCATCGCTTACCTCATCATGAAACTGAGCGATATCAGAAGGCTGAGATATCGCTTTGCCGCGTCTACAAGAGACCTGGGGTAGAAGACCATCCTTCACTTCCTCGCTATCTCGCAACCCGGCCATCTTCGTTGAGAGCTTCACATTCAGACAAGAACAAGTACATTAATGACCAAATGATTCATCAGAACGTGGGATTTGTGGCAAAATCACCCCAAATTGATCAAATAGTTGACAAAATAAACGAAGCTGAAGGAAGTAGCACTGCAGGTTCAGATGTCACCACTGCAGCCCTTGGACTCTCCCAACACAACATTGCTTACCGTACAGCAATGGGCCTACCAGCAGTTCAAATGGAGGATGAAGGGTTAATGCTTATGCAGCAACCAAAGCCAGCACAAGCAGCCGCGGCCGCCGCCTCCTCATTAATCCGGCCGGCCACCTTCTTTGGCCCAGCTGACGCTGCTTCTTCGGTGTCATCTACTAATGCTATGGCGGATGATCTCAATAGGCTAGTAAGCTATCAACAACTATACTGCAATGCTCAAAGTCAGCACCCCAATAACCAGCTGTTCTCTAATTTGCTGATGCAACCACCACCAGTGGCTTTCACCTCTCTACCAAATTCGCTCCCAACCACCTTCCCCGACAGACTGTGGGAGTGGAATCCAATTCAAGAGACAAAACGGGAGTACAGCAACATGTCCTTCAAGTAA 1218 0.4844 MGIAANSSSSTMSLGHGHSQDDTTATTSATNNHNKAADHHDHDMVMPGFRFHPTEEELVEFYLRRKVEGKSFNVELITFLDLYSYDPWELPAMAAIGEKEWFFYVPRDRKYRNGDRPNRVTPSGYWKATGADRMIKTEHFRSIGLKKTLVFYFGKAPKGIRTSWIMNEHRLPHHETERYQKAEISLCRVYKRPGVEDHPSLPRYLATRPSSLRASHSDKNKYINDQMIHQNVGFVAKSPQIDQIVDKINEAEGSSTAGSDVTTAALGLSQHNIAYRTAMGLPAVQMEDEGLMLMQQPKPAQAAAAAASSLIRPATFFGPADAASSVSSTNAMADDLNRLVSYQQLYCNAQSQHPNNQLFSNLLMQPPPVAFTSLPNSLPTTFPDRLWEWNPIQETKREYSNMSFK 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01611 405 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 43 300 - -
Bach6g01611 405 SUPERFAMILY NAC domain 44 192 IPR036093 GO:0003677|GO:0006355
Bach6g01611 405 Gene3D NAC domain 54 195 IPR036093 GO:0003677|GO:0006355
Bach6g01611 405 MobiDBLite consensus disorder prediction 1 33 - -
Bach6g01611 405 ProSiteProfiles NAC domain profile. 45 192 IPR003441 GO:0003677|GO:0006355
Bach6g01611 405 MobiDBLite consensus disorder prediction 1 46 - -
Bach6g01611 405 Pfam No apical meristem (NAM) protein 47 171 IPR003441 GO:0003677|GO:0006355
Bach6g01611 405 FunFam NAC domain-containing protein 35 54 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01611 Bach-Chr6 23665100 23668498 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01611 44 219 NAC Transcription Factor Family AT2G02450 85.227 9.00e-111 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bach6g01611 NAM 4.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01611 - - gmx:100792622 494.197