Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01534 ATGGCAAAGTCATACTACTGTTTTTACGTTTTCTCTTTTCTTTCCTTCTTAGTTATCCAGTTTGGGGTAGGGGCTACTCTACTTTTAGGAGGAAAGACATTAGTAATTGGGATACCCATCAAAACTGACTTTACCGAGTTCGTTGATGTTAAACTGAATAGTACAAATCAGCCCATACAGAACCAGGTTACGGGGTACTCAATTGAGGTTTTCTTTGCTGCGGTATCTTATCTGGAAGGGTTAGGCTTACATGTTTCTTACGAGTTTGAAGCTTTTGTAAACAGAGAGGGGATGATTGCTGGCACTTACAATGAACTTCTGCATCAAATTCCTGAAAAGTATGATGCTGTGGTGGGCGATGTAACTATTGTGGCGAACCGATCAACCTCTGTAGATTTTACATTGCCATATGCAGAATCGGGCGTGGGGATGCTTGTACAAATTAGACATAGTCGACACTTAGACATGTGGAGCTTTCTCCAGCCATTTAGTTGGGATCTTTGGCTGTCCATCATCTTATTTTGTGTCTTTATAGGATTTGCATTATTGTTCATGGAACGTAATGCAAAGAAAGAAGCAGGAGTTGAAGATTTACCAGGTCAAAAACAATTGACCGGACCATCAATTTTATGGCTTCCTATAGCTCAAGCAGTGCTTCCTGAAAAATCTGTTGCCAAGAAATGCTCTAGGTTTGTACTTCTGGTATGGTTAGGGTTGGCATTTGTTCTCATGCAAAGCTACACAGCAAATTTGTCCTCAATCTTGACATTAGATCAAATAAAGCCAAGTTACCCTACCATCGATCGTCTAAAAAGAGACCAGGAAAATGTTGGATACCGACACAGTTCTTTCATAGGAGATTTCTTGAAAAATCACTTACAGTTCGATGAATCAAGGCTTAAAAATTACTCCAAGATTAAAGATTATCGTGATGCTTTAAGTAAAGGAACTCGAAAAGGAGGTATTGCTGCTATGTTTGATGAATTACCCTACATTAAAGTCTTCCTCAAAAGGTACGGCTCCAAGTATATGATGGCAGGACCTACCTATCGAAACGATGGTTTTGGTTTTGCATTTCCACTAAATTCCAACCTTACGTCTCACTTCTCTAGAGCCATATTAAATGTAATCGAAGGTCCAACCATGGATAAGATTGAAGAAAAATACTTTGGCAACGATCATGATGCTCTCCAAGATCAGTATGACCAGATGTCAGAAGATACTCCCAGACTCACCACACAGAGCTTTGCAGGCCTATTCATAATCACTGGATCTCTTATCTTATTAGCTTTGCTAGTCTCTGAAAGCCGTATTTGGCTAAGAGCAGTTATGCTGGTCAAAACTTTCAGCAAAAGATATAGATTCTCCTCAAGTTCTATAAAGGTCAATCTATCTGAGGATGGTTCTACAATTGGAAGGGATGCTGGCTCAACCAATGAAGGAAATAACCATCCGGAAAGCTTTCCAAGATCTACTTCATTGCCCGTGTGA 1491 0.3984 MAKSYYCFYVFSFLSFLVIQFGVGATLLLGGKTLVIGIPIKTDFTEFVDVKLNSTNQPIQNQVTGYSIEVFFAAVSYLEGLGLHVSYEFEAFVNREGMIAGTYNELLHQIPEKYDAVVGDVTIVANRSTSVDFTLPYAESGVGMLVQIRHSRHLDMWSFLQPFSWDLWLSIILFCVFIGFALLFMERNAKKEAGVEDLPGQKQLTGPSILWLPIAQAVLPEKSVAKKCSRFVLLVWLGLAFVLMQSYTANLSSILTLDQIKPSYPTIDRLKRDQENVGYRHSSFIGDFLKNHLQFDESRLKNYSKIKDYRDALSKGTRKGGIAAMFDELPYIKVFLKRYGSKYMMAGPTYRNDGFGFAFPLNSNLTSHFSRAILNVIEGPTMDKIEEKYFGNDHDALQDQYDQMSEDTPRLTTQSFAGLFIITGSLILLALLVSESRIWLRAVMLVKTFSKRYRFSSSSIKVNLSEDGSTIGRDAGSTNEGNNHPESFPRSTSLPV 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01534 496 Gene3D - 157 300 - -
Bach6g01534 496 CDD GluR_Plant 32 390 - -
Bach6g01534 496 Pfam Bacterial extracellular solute-binding proteins, family 3 60 392 IPR001638 -
Bach6g01534 496 MobiDBLite consensus disorder prediction 468 496 - -
Bach6g01534 496 SUPERFAMILY Periplasmic binding protein-like II 12 393 - -
Bach6g01534 496 Pfam Ligand-gated ion channel 393 424 IPR001320 GO:0015276|GO:0016020
Bach6g01534 496 Gene3D - 28 156 - -
Bach6g01534 496 Gene3D - 341 396 - -
Bach6g01534 496 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 31 439 IPR015683 -
Bach6g01534 496 SMART GluR_14 33 392 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01534 Bach-Chr6 20356765 20360051 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01534 29 460 Ion Channels AT2G29100 38.596 5.00e-80 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01534 K05387 - aip:107641909 472.626