Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01528 ATGGCAAAGTCATACTATTGTTTTTACCTTTTCTCTTTTCTTTCCTTCTTAGTTGCCCAGTTTGGGGTAGGGGCTACTCCTCTACTTTTAGGAGGAAAGACGTTAAGAATTGGGATACCCACCAAAACTGACTTTACTGCGTTTGTTGATGTCGAACTGAATAGTACAAACCAGCCCATACAGAACCAGGTTACTGGGTACTCGATTGAGGTTTTCTTTGCCACGGTATCTTATCTGGAAGGGTTAGGCTTACATGTTTCTTATGAGTTTGAAGCTTTTGTAAACAGAGAGGGGATGATTGCTGGCACTTACGATGACCTTCTGCGTCAAATTCCTGCAAAGTATGATGCTGTGGTGGGCGATGTAACTATTGTGGCAAACCGATCAACCTATGTAGATTTTACATTGCCATACGCAGAATCAGGCGTGGGGATGCTTATACAAATTAGACATGGTCGACACTTAGACATGTGGATCTTTCTCCAGCCATTTAGTTGGGATCTTTGGCTGTCCATCATCTTATTTTGTATCTTCATAGGATTTACCTTATTGTTCATGGAACGTAATGCAAAGAAAGAAGCAGGAGTTGAAGATTCACCAAGTCAAAAACAATTGACCGGACCATCAATTTTATGGCTTCCTATAGCTCAAGCAGTGCTTCCTGAAAAATCTGTTGCCAAGAAATGCTCTAGGTTTGTACTTCTGGTGTGGTTAGGGTTGGCATTTGTTCTCATGCAAAGCTACACAGCAAATTTGTCCTCAATCTTGACATTAGATCAAATAAAGCCAAGTTATCCTACCATTGATAGTCTAAAAAGAGACCAGGAAAATGTTGGATACCGACACGGTTCTTTCATAGCAGATTTATTGAAAAATCACTTACAGTTCGATGAATCAAGGCTTAAAAATTACTCCAAGATTAAAGATTATCGTGATGCTTTAAGTAAAGGAACTCGAAAAGGAGGTATTGCTGCTATGTTTGATGAAATACCCTACATTAAAGTCTTCCTCAAAAGGTACGGCTCCAAGTATATGATGGCTGGACCTACCTACCGAAACGATGGTTTTGGTTTTGCATTCCCACTAGATTCTAACCTTACGTCTCACTTCTCTAGAGCCATATTAAATGTAATCGAAAGTCCAACGATGGATAAGATTGAAGAAAAATACTTTGGCAACAATAATGATGCTCTCCAAGATCAGTATGACCAGATGTCAGAAGATACTCCCAGCCTCACCACACACAGCTTTGCAGGCCTGTTCATAATCACTGGATCCCTTATCTTATTAGCTTTGCTAGTCTCTGAAAGCCGTATTTGGCTAAGGGCAGTTATGCTGGTCAAAACTTTCAGCAAAAGGTATATATTCTCCTCAAGTTCTAAAAAGGTCAATCCATCTGAGGATGGTTCTACATTTGGAAGGGATACTGGCTCAACCAATGAAGGAAATAACCATCCAGAAAGGTTTCCAAGATCTCCTTCATTGCCCGTGTAA 1494 0.4023 MAKSYYCFYLFSFLSFLVAQFGVGATPLLLGGKTLRIGIPTKTDFTAFVDVELNSTNQPIQNQVTGYSIEVFFATVSYLEGLGLHVSYEFEAFVNREGMIAGTYDDLLRQIPAKYDAVVGDVTIVANRSTYVDFTLPYAESGVGMLIQIRHGRHLDMWIFLQPFSWDLWLSIILFCIFIGFTLLFMERNAKKEAGVEDSPSQKQLTGPSILWLPIAQAVLPEKSVAKKCSRFVLLVWLGLAFVLMQSYTANLSSILTLDQIKPSYPTIDSLKRDQENVGYRHGSFIADLLKNHLQFDESRLKNYSKIKDYRDALSKGTRKGGIAAMFDEIPYIKVFLKRYGSKYMMAGPTYRNDGFGFAFPLDSNLTSHFSRAILNVIESPTMDKIEEKYFGNNNDALQDQYDQMSEDTPSLTTHSFAGLFIITGSLILLALLVSESRIWLRAVMLVKTFSKRYIFSSSSKKVNPSEDGSTFGRDTGSTNEGNNHPERFPRSPSLPV 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01528 497 Gene3D - 342 397 - -
Bach6g01528 497 SMART GluR_14 34 393 IPR001320 GO:0015276|GO:0016020
Bach6g01528 497 SUPERFAMILY Periplasmic binding protein-like II 3 394 - -
Bach6g01528 497 Gene3D - 158 301 - -
Bach6g01528 497 FunFam Glutamate receptor 308 356 - -
Bach6g01528 497 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 440 IPR015683 -
Bach6g01528 497 MobiDBLite consensus disorder prediction 460 487 - -
Bach6g01528 497 CDD GluR_Plant 33 391 - -
Bach6g01528 497 MobiDBLite consensus disorder prediction 460 497 - -
Bach6g01528 497 Pfam Ligand-gated ion channel 394 425 IPR001320 GO:0015276|GO:0016020
Bach6g01528 497 Pfam Bacterial extracellular solute-binding proteins, family 3 61 393 IPR001638 -
Bach6g01528 497 Gene3D - 29 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01528 Bach-Chr6 20184171 20186766 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01528 32 494 Ion Channels AT2G29100 37.759 5.80e-81 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01528 K05387 - aip:107641909 477.248