Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01525 ATGGCAAAGTCATACTATTATTGCATTTATCTTTTCCCTTTTCTCTCCTTAGTTGCCCAGTTTGGGGTAGGGGCAACTGCTCCACTTTTGGGAGGAAAGACGTTGATAATTGGGGTACCCATGAAAGCTGATTATATCGAGTTTGTCGATGTAAAACTAAATAGTACAAACCAGACGATACAGAACCAGGTTTCTGGGTTCTCAATCGACGTTTTCAAGGCTGCAGTATCTTATCTGGAAGGGTTAGATTTACATGTTTCTTATGTGTTTGAAGCATTTATAAACAGAGATGGGAAGAGTGCAGGCACTTACAACGAACTTTTGCATCAGATTCCAGAAAAGTATGACGCTGTGGTGGGTGATGTAACTATTTTGGCGAACCGATCAACCTATGTAGAATTTACGATGCCATATACAGAATCAGGCGTGAGGATGCTTATACAAGTTAGACATAGTAGACACTTAAATATGTGGATCTTTCTGCGGCCATTTAGTTGGGATCTTTGGCTGTCCATCATCTTATTTTGTGTCTTTATAGGATTTGCATTATTCTTCATGGAACGTAATGCAAATAAAGAAGCAGGAATTGAAGAGTCACCTGATCGAAAACAACCTTCTGGACCATCAATTTTGTGGCTTCCTATAACTCATGTTGTGCTTCCTGAAAGAGAATCTGTTGCCAAGAAATGCTCCAGGTTTGTGCTGTTGGTGTGGTTAGGGTTGGCATTCGTTCTCATGCAAAGCTACACAGCAAGTTTGTCCTCAATCTTGACATTGGATCAAATAAAGCCAAGTTACCCCACCATCGATAGTCTGAAAAGGGACCAAGAAAATGTTGGATATCGGTATGCTTCTTTCGTAGGAGATTTCTTAAAAGATCACTTACAGTTCGATGAATCAAGGCTTAGAGTTTACTCCGAGATTGAAGATTTTCGTGATGCCTTAAGAAAAGGAACTCATAAAGGAGGTATTGCTGCTATGTTTGATGAATTACCCTACATCAAAGTTTTTCTCAAAAAGTACGGCTCCAAGTATACGATGGCTGGACCTACCTATCGGAACGCTGGTTTTGGTTTTGCATTCCCATTAGGTTCCAAGCTTACGTCTGACTTCTCAAGAGCCATATTAAATGTAACAGAAGGTCCAACGATGGATAAGTTTGAAGAAACATACTTTGGCGTCAATAATGATGATCTCCAATATCAGTATGACCAAATATCAGCAGAAACTCCCAGCCTTACCGCGCAGAGCTTTGCAGGCCTGTTCATAATCACTGGATCCCTTATCTTACTTGCTTTGCTAGTCTCAGAAAGCTTTATTTGGCAAAAGCCTATTAGGCTGGCCAAAACTTTCAGCCAAAGATATCTACTCATCTCAAGGTCTAAAAAAATAAACACATCAGAGGAAGGTTCTGCAAATGGAAGGGATGCTATCTCAACAAATGAAGGAAATAACCATCCAGAAAACCTTCCAAGATGTCCCTCATTGTCTGTGTAA 1497 0.4021 MAKSYYYCIYLFPFLSLVAQFGVGATAPLLGGKTLIIGVPMKADYIEFVDVKLNSTNQTIQNQVSGFSIDVFKAAVSYLEGLDLHVSYVFEAFINRDGKSAGTYNELLHQIPEKYDAVVGDVTILANRSTYVEFTMPYTESGVRMLIQVRHSRHLNMWIFLRPFSWDLWLSIILFCVFIGFALFFMERNANKEAGIEESPDRKQPSGPSILWLPITHVVLPERESVAKKCSRFVLLVWLGLAFVLMQSYTASLSSILTLDQIKPSYPTIDSLKRDQENVGYRYASFVGDFLKDHLQFDESRLRVYSEIEDFRDALRKGTHKGGIAAMFDELPYIKVFLKKYGSKYTMAGPTYRNAGFGFAFPLGSKLTSDFSRAILNVTEGPTMDKFEETYFGVNNDDLQYQYDQISAETPSLTAQSFAGLFIITGSLILLALLVSESFIWQKPIRLAKTFSQRYLLISRSKKINTSEEGSANGRDAISTNEGNNHPENLPRCPSLSV 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01525 498 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 460 IPR015683 -
Bach6g01525 498 Gene3D - 358 392 - -
Bach6g01525 498 MobiDBLite consensus disorder prediction 467 498 - -
Bach6g01525 498 Gene3D - 158 296 - -
Bach6g01525 498 Gene3D - 312 357 - -
Bach6g01525 498 Gene3D - 29 157 - -
Bach6g01525 498 CDD GluR_Plant 33 392 - -
Bach6g01525 498 SMART GluR_14 34 394 IPR001320 GO:0015276|GO:0016020
Bach6g01525 498 Pfam Ligand-gated ion channel 394 426 IPR001320 GO:0015276|GO:0016020
Bach6g01525 498 PRINTS NMDA receptor signature 168 193 IPR001508 GO:0005216|GO:0006811|GO:0016020|GO:0038023
Bach6g01525 498 PRINTS NMDA receptor signature 233 260 IPR001508 GO:0005216|GO:0006811|GO:0016020|GO:0038023
Bach6g01525 498 SUPERFAMILY Periplasmic binding protein-like II 15 394 - -
Bach6g01525 498 Pfam Bacterial extracellular solute-binding proteins, family 3 61 393 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01525 Bach-Chr6 20099496 20102550 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01525 31 435 Ion Channels AT2G29120 39.951 1.75e-79 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01525 K05387 - aip:107641909 479.944