Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01524 ATGGCAAAGTTATACCATTATGTTTATATTTTCCCTGTTCTTTCCCTCATAGTTGCCCAGTTTGGGGTAGGGGCTATTGCTGTACTTTTAGGAGGGAAGAAGTTGATAATTGGGGTACCCTTGAGTTCTGATTTTACTGAGTTTGTCAATGTAAAACTGAATAGTACAAACCAGACGATTCAGAACCAGGTTACTGGGTTCTCAATTGACGTTTTCATGGCTACATTGTCTTATCTAGAAGGGTTAGATTTACAAGCTTCTTATGAGTGTGAAGCTTTTGTAAACAAGGAGGGGAAGAGTGCTGGCAATTACAACCAACTTCTGCATCAGATTCCTGAAAAGGTTAGAAGATTTGTGTTATTCTTCATGGAACGTAATGCAAATAAAGAAGCTGGAATTGAAGATTCAGCAGGTCGAAAACAACTTATTGGACCATCAATTTTATGGCTTCCTCTCGCTCAAGCAATGCTTCCAGAAAGAGAATCTGTTGAGAAGAAATGCTCAAGATTTGTACTACTGGTATGGTTAGGGTTGGCATTCGTTCTCATGCAAAGCTACACAGCAAGTTTGTCAGCAATGTTGACAGTAGATCAAATAAAGCCAAATTACCCTACCATTGATAGACTAAAAATAGACAGAGAAAATGTTGGATACCGAAATGATTCTTTCATAGGAGATTTATTGAGAGATCACTTACAATTTGATGAATCAAGGCTTAAAAATTACTCAAACATTGAAGATTATCGTGAAGCCCTAAGAAAAGGAACTCAAAAAGGAGGTATTGCTGCTATGTTTGATGAAATACCCTACATTAAAGTCTTCCTTAAAAGGTACGGTTCCAAGTATATGATGGCTGGACCTACCTATCGGAACGATGGTTTTGGCTTTGCATTCCCAATAGGCTCCAACCTAACCTCTTACTTCTCAAGAGCCATATTAAATGTCAATGAAAGTCCGACGATGGATAAGATTGAAGAAAAATACTTTGGCACCAATCATGATGATCTCGAAGATCAATATGACCAAATATCAGATAAAACTCCCAGCCTCTCCACACAGAGCTTTGCAGGCTTGTTCATAGTCACTGGATCCCTTATCTTACTAGCGTTGCTTGTCTCTGAAAGCTGTATTTGGCGAAAGCCAGTTATGCTGGCCAAAACTTTTAGCCAAAGATATCTATTCTCTTCAAGTTCTAAAAAAGTCAATCCACCAGAGGATGGTTCTGCAAATGGAAGGGATGCTGACTCAGAAAATGAAGGAAATAGCCATCCAGAAAGCCTTCCAAAATCTCCTTCATTACCCGTGTAA 1308 0.3884 MAKLYHYVYIFPVLSLIVAQFGVGAIAVLLGGKKLIIGVPLSSDFTEFVNVKLNSTNQTIQNQVTGFSIDVFMATLSYLEGLDLQASYECEAFVNKEGKSAGNYNQLLHQIPEKVRRFVLFFMERNANKEAGIEDSAGRKQLIGPSILWLPLAQAMLPERESVEKKCSRFVLLVWLGLAFVLMQSYTASLSAMLTVDQIKPNYPTIDRLKIDRENVGYRNDSFIGDLLRDHLQFDESRLKNYSNIEDYREALRKGTQKGGIAAMFDEIPYIKVFLKRYGSKYMMAGPTYRNDGFGFAFPIGSNLTSYFSRAILNVNESPTMDKIEEKYFGTNHDDLEDQYDQISDKTPSLSTQSFAGLFIVTGSLILLALLVSESCIWRKPVMLAKTFSQRYLFSSSSKKVNPPEDGSANGRDADSENEGNSHPESLPKSPSLPV 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01524 435 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 118 380 IPR015683 -
Bach6g01524 435 Pfam Ligand-gated ion channel 118 363 IPR001320 GO:0015276|GO:0016020
Bach6g01524 435 Gene3D - 242 294 - -
Bach6g01524 435 Gene3D - 117 224 - -
Bach6g01524 435 Gene3D - 295 329 - -
Bach6g01524 435 Pfam Bacterial extracellular solute-binding proteins, family 3 183 330 IPR001638 -
Bach6g01524 435 SMART GluR_14 34 331 IPR001320 GO:0015276|GO:0016020
Bach6g01524 435 MobiDBLite consensus disorder prediction 395 435 - -
Bach6g01524 435 SUPERFAMILY Periplasmic binding protein-like II 14 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01524 Bach-Chr6 20082135 20085674 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01524 32 421 Ion Channels AT5G11210 31.042 6.11e-47 171