Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01516 ATGGAGTTCCAGAAACTAGACAACCAAAAGACCAACACAGACCAAGTAGTCATTACCGTCGACCAGCAGCAAAGCACTAAACTAGATCAACCCAAAACCAAAATCCTAAGACGCCTCAATTTTTCCAAACCCAGATCCCGTTTTGAGGAGATCAACTATCCTTTGCCCCCACCAAAATCCATCCCTGAATCAGAAGAATCCCAACCCCAAAATTCCCATGGCAACAACAACTCTTACTCCTCCACCGACGAAGAAGATGACGAAGAATGGTTCGAAGATGAACATGCCGAAGATGAATCCTACAAAAAGTACAGAAAGAAGAGAAAAAAGATCAACAAGAGGGCCTTAATAGAATGGACGTTGTTCCTTATCATCACCACTTGCTTGATATGCTCTCTCACCCTTAAATCCTTCCAGAACAAGGTCGAATGCACCCTCCAACTTTGGAAATGGTGCCTGATTGTCTTGGTAATGTTCTGTGGTCGTCTTGTCTCTGGTTGGGTAGTAGGGTTCATCGCGTTCCTCATTGAACGAAACTTCATGTTGAGAGAGAAAGTTCTCTACTTTGTCTATGGCTTACGCAAGAGCATTCAAAATTGTGCTTGGTTAGGTCTAGTTCTAGTAGCATGGTTGATTATCTTCCATGATGCTCATAACCACAATAAAGTCCTCAAATGGGTGTTTAGATTTCTCATAGCTGTTCTCATTGGTGCAACCATTTGGTTGTTAAAGATAGTTCTAGTTAAAGTTCTTGCGTCGTCGTTTCATGTGGCAACTTTCTTTGATAGAATGAAAGAGAGTGTTTTTCATCACTATGTGTTGGATTCACTATCTGGGCCACCATTAGATGAGAAAGAGACGGAAAACCCACGTCGTCATTTTCAAGCATCGAAATCATTGCCAGCTAGGTTTAGATATGGCAAGCATCACCCTTTGTCGAGGTCTAGGAGAGATGGGTCGAGGAGACTTGACATGGAAAAACTTAGAAAGCTGAGCATGGAGGGCAGAGCTACAGCTTGGAGTGTGAAGAGGTTGGTGAACCATATTATATCGTCAGGATTGTCGACGATTTCGAGGACTGTGGATGATTTTGCAGATGCAGAATCAGAGATTACTAGTGAGTGGGAAGCAAGGGCTTGTGCTCAAAGGATCTTCAAGAATGTTGCAAAGCCTGGAGCCAAATACATCGAAGAAGAAGATTTATTCAGGTTTCTGAAGAGGGACGAAGTCTATATGATATTTCCTCTATTTGAAGGAGCAATTGAAACAGGAAGAATCACAAAGTCTTCATTCAGAAACTGGGTGGTACATGCCTATATAGAGAGAAAAGCTTTGGCTCATTCCTTGAACGACACAAAGACTGCTGTTCACCAACTCCACAAATTAGCAAGTGCAGTTGTGGTCGTTATAATAACTGTGGTCTCACTTCTGGTGATGGGTTTGGCTACAACCAAGGTCGTCTTTGTAGTCACCTCTCAACTTCTGCTCGTGGGCTTCATGTTTCAAAATATGTGCAAAACGGTATTTGAATCAATCATTTTTGTCTTTGTGATGCATCCTTTTGACGTGGGGGATCGATGTGTCGTTGATGGTGTACAGATGATTGTAGAAGAGATGAATATATTGTCAACAGTATTCTTAAGATATGACAACGAAAAGATATACTATCCAAATTCTGTTCTTCTTACAAAACCTATAAGCAATTTCAGAAGAAGCCCTGATATGGCTGATAGTGTGGACTTCACAATTGACGTATCTACCCCTATGGATGACATTTCTGCCCTCAAGAAGGGTATACAAGCGTACATTGAGAGCAAACCAAAGTACTGGAGCCCTAAACACACAGTCATTCTGAAGGACATTGAGAACCTGGACAAGATGAATATGGCTTTATATGTTCAACACACTATAAACCATCAGAACTTTGGAGAGAGGACTACTCGGAGATCCGAGCTTTTGTTCGAGCTGAAGAAGATATTTGAGAACCTTGGCATAAAGTATCACCTTCTTCCCCAAGAAATTCATCTCACGCAAGTCAACCTGAGAAATGGAAGCCTAGCAGTGTCATCTTGAGATTGAAAACTTTCTCTTTTTTAACACATGACCTACATTTTCTGGTTTTAATGTGACAGAAAAGAAATGGAAGGGGTTGACAAGGCTATTAGGGTTCAGATGAAGTGTCAAAAAGAATGCCTCATTTTACTGACTGAAATGGATGGGTGTATG 2226 0.4142 MEFQKLDNQKTNTDQVVITVDQQQSTKLDQPKTKILRRLNFSKPRSRFEEINYPLPPPKSIPESEESQPQNSHGNNNSYSSTDEEDDEEWFEDEHAEDESYKKYRKKRKKINKRALIEWTLFLIITTCLICSLTLKSFQNKVECTLQLWKWCLIVLVMFCGRLVSGWVVGFIAFLIERNFMLREKVLYFVYGLRKSIQNCAWLGLVLVAWLIIFHDAHNHNKVLKWVFRFLIAVLIGATIWLLKIVLVKVLASSFHVATFFDRMKESVFHHYVLDSLSGPPLDEKETENPRRHFQASKSLPARFRYGKHHPLSRSRRDGSRRLDMEKLRKLSMEGRATAWSVKRLVNHIISSGLSTISRTVDDFADAESEITSEWEARACAQRIFKNVAKPGAKYIEEEDLFRFLKRDEVYMIFPLFEGAIETGRITKSSFRNWVVHAYIERKALAHSLNDTKTAVHQLHKLASAVVVVIITVVSLLVMGLATTKVVFVVTSQLLLVGFMFQNMCKTVFESIIFVFVMHPFDVGDRCVVDGVQMIVEEMNILSTVFLRYDNEKIYYPNSVLLTKPISNFRRSPDMADSVDFTIDVSTPMDDISALKKGIQAYIESKPKYWSPKHTVILKDIENLDKMNMALYVQHTINHQNFGERTTRRSELLFELKKIFENLGIKYHLLPQEIHLTQVNLRNGSLAVSS 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01516 690 Gene3D - 520 569 IPR023408 -
Bach6g01516 690 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 13 679 IPR016688 -
Bach6g01516 690 SUPERFAMILY Sm-like ribonucleoproteins 510 569 IPR010920 -
Bach6g01516 690 Pfam Mechanosensitive ion channel 461 666 IPR006685 GO:0016020|GO:0055085
Bach6g01516 690 MobiDBLite consensus disorder prediction 1 93 - -
Bach6g01516 690 MobiDBLite consensus disorder prediction 64 79 - -
Bach6g01516 690 PIRSF Memb_At2g17000 4 688 IPR016688 -
Bach6g01516 690 MobiDBLite consensus disorder prediction 1 30 - -
Bach6g01516 690 FunFam Predicted mechanosensitive ion channel 520 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01516 Bach-Chr6 19895252 19900805 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01516 22 680 Mechanosensitive Ion Channel Family AT5G12080 46.041 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01516 K22048 - rcu:8284311 971.844