Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01484 ATGGCTTATAAAGAATATGATAAGTTGGATCTTCGTGAACATCCCCGGCTAGAACAATTGTGGCATGGCAACGTTCTCCCACGAGAAAACAGCTTTACCAATTTGAGAAAGCTGGTGGTGGAGAATTGTGAATTTCTATCAACTGTAATTCCATGTCATTTACTTCCTTACTTGAAGAACTTGAAACGGTTGTATGTACGGAGTTGCAGTTTAGTAGAGAAAATATTTGATATCAGTGACATCAAGTCTGGGAAAATACACTTCCATTTGGAGGAACTGAGATTAGAGAAGCTGCCAAACTTGAAGAATGTATGGGATTTGGTAAAGAATCCTCAAAGATTTTTCAGCATTCAAAATCTAAAAAATGTGAGTGCAACAAGTTGTCGGAGTCTAACTTTTCTTTTTCCAGCATCCTTGGCAGAGGATCTTGTGAAGCTTGAAAGTCTTTATATAGAAAACTGTGAGGAAATGAAAGAAATTGTTGGAAAGGATGAGGCAGATGCGGAAGGAGCAATTTTCAAATTTATATTCCCTTATTTAACCTCCTTGACTCTAAAAGAGTTATTCAAGCTCAAGTGCTTCTTCAGGGTGTTCCATTGTGGTATGTTGGAGATACTTACTCAAGAATTGCAAAGTAATCAAGAAGCACCCCTGGAAGATGACGTTGGAAGTTCTACTAATGAACACCCCCTGTATTCACTTCATCAAGAGGTTATTTTCAAATTGGAGAATCTAACATTTGACCCAAAAGATATTATGATGGTATCTCGTGAAGATTTTCTGGGAGGCCTTTACAAAACAAAAAAGTTACTTCTGCAGTGCTTTCACAATGTCAATCAGGAAGATACCTCGTTGTATAGACTCCTAAATAACATACCCAATGTTGATACTCTTGAAGTATTTTGCAGTGGCTTCAAGAATCAAAAAAGAGCTTTGAATTGGATGAGACATGGTTCCTGCTGGGACACTGATCTTAATAGCACAATAGTGAAGTTATTCAATGAAAAGGTAGAAAAAGTATGGCACGGAGAAGTACCGCTGCCAAAAGCCTGCTTTGGCAAATTGGAAACTTTGGTGGTTGAAAATTGTGATTTTTTATTAAAGGTGATTCCGTCTCATATAGTCACTTACTTGAAGAAGTTGAAAAAGCTGCAAGTAAAGAATTGCATTCATGCAGAGGTAATATTTGATATAAATGACTTGGACATGGCGAAAATTGAGGAAGTATCTTTCTCTTTGGAGATATTAACTTTAGGTGAGCTCCCTAATCTAAAGCATGTATGGAGTAAGGATACTGAAGGAATTGTTGGCTTAGCAAATCTGCAAGAAGTGCAAATTACCAATTGTAAACGTCTAAAAACTCTGTTTACAACATCCTTGTCCAAAAACCTTGAAAAACTCGAAATGCTTACAATAGAATCATGTGAGGAAATGGAGGAAATTTTTGGAAAGGATAAAGTAGCTGTAGAAGGCATCAGTGCTGAGTTTGTGTTCCCTTGGTTAACCTTGTTGGTTCTGTCTGAGAACCCGGAGCTCAAGTTCTTTAATGTTCGAAGACATAATTTGACATGCCCAAACTTAAAATATTTGCGTGTCTATGGTTGTGATAAGCTGGCAATGTTCATATTAGATTCCCAAAGCTACCAAGAAGGACAAGTAGATGATCATCAAGGTGGTATTTCAGTCAATGCACAGCCATTGTTCTCAATTCAAAAGGTTCTTCCCAAATTGGAGGAAGTGTCACTCAATGTAAAAGAGCCCATGATGTTATGGCATGAAGAATCAGAGGAAACTCCCCTTCGCAATATAAAGTGTCTTCAACTGTACTGTTTTCACAATGTCAACCAGACAGATACTTTGTCATTTGGATTCCTTTTAAAGGTACCAAAAATGGAAACTCTTGCTATTGCTTGCAGTGAGTTTAAGGAGATATTCCCCTCTCAGAGACTTGAAGATGACCACATTAGAAGACTTGCACAATTGAAAGGATTGAGACTCATTAATCCATCTAATCTCAGTTCCATAGGGTTAGAGCACTCTTGGCAAGATCGATTCTGTGAAAATCTTGAAGCCTTACAGATTTGGACATGTCCTCATTTGACAAATATAGTACAATCTGCAGTGTCTTTCTCGAATCTGAAAAAATTGCTTATAAATCAATGTCATGGATTGGAATGCTTATTCACATACTCAACATTGAAAAGTTTGACTAAGGATAAGAAGGTCATGGCATTGAAGGAATCCAAGAAGAGGTTCGAGGAGAGGTTCAAGACTGGCAAGAACAGGTGGTTCTTTACTAAGCTTAGGAGTGCTCATGATTTCATTTTTGTTTTTGATATGCTAGTCTCTCCTGATGTCTTTGACTTGGTGCTGTGGAAATACATTGTCTGGCTTAGTGGTTTGCATGTGTGGTATTCAAGTGAAATCCTTCTAAATGTATTGCTTGATATGCTTGTTGATGGCAAGTTTGATATTAAAACGAGTCCTATAATAAAGAATGAAGATGTAATTATACTGTATCTGATTGTACTGCAAAGGAGCAATGAATCATTGCGACAGGATGGACTCAACTTGTTTCAGCAGCTGCTAAGGGATTCTATTTCTAATTGA 2610 0.3743 MAYKEYDKLDLREHPRLEQLWHGNVLPRENSFTNLRKLVVENCEFLSTVIPCHLLPYLKNLKRLYVRSCSLVEKIFDISDIKSGKIHFHLEELRLEKLPNLKNVWDLVKNPQRFFSIQNLKNVSATSCRSLTFLFPASLAEDLVKLESLYIENCEEMKEIVGKDEADAEGAIFKFIFPYLTSLTLKELFKLKCFFRVFHCGMLEILTQELQSNQEAPLEDDVGSSTNEHPLYSLHQEVIFKLENLTFDPKDIMMVSREDFLGGLYKTKKLLLQCFHNVNQEDTSLYRLLNNIPNVDTLEVFCSGFKNQKRALNWMRHGSCWDTDLNSTIVKLFNEKVEKVWHGEVPLPKACFGKLETLVVENCDFLLKVIPSHIVTYLKKLKKLQVKNCIHAEVIFDINDLDMAKIEEVSFSLEILTLGELPNLKHVWSKDTEGIVGLANLQEVQITNCKRLKTLFTTSLSKNLEKLEMLTIESCEEMEEIFGKDKVAVEGISAEFVFPWLTLLVLSENPELKFFNVRRHNLTCPNLKYLRVYGCDKLAMFILDSQSYQEGQVDDHQGGISVNAQPLFSIQKVLPKLEEVSLNVKEPMMLWHEESEETPLRNIKCLQLYCFHNVNQTDTLSFGFLLKVPKMETLAIACSEFKEIFPSQRLEDDHIRRLAQLKGLRLINPSNLSSIGLEHSWQDRFCENLEALQIWTCPHLTNIVQSAVSFSNLKKLLINQCHGLECLFTYSTLKSLTKDKKVMALKESKKRFEERFKTGKNRWFFTKLRSAHDFIFVFDMLVSPDVFDLVLWKYIVWLSGLHVWYSSEILLNVLLDMLVDGKFDIKTSPIIKNEDVIILYLIVLQRSNESLRQDGLNLFQQLLRDSISN 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01484 869 SUPERFAMILY RNI-like 31 425 - -
Bach6g01484 869 Pfam Ribosomal L27e protein family 738 769 IPR001141 GO:0003735|GO:0005840|GO:0006412
Bach6g01484 869 SUPERFAMILY RNI-like 413 728 - -
Bach6g01484 869 Pfam Neurobeachin alpha solenoid region 802 869 IPR046852 -
Bach6g01484 869 Gene3D Ribonuclease Inhibitor 350 552 IPR032675 -
Bach6g01484 869 Gene3D Ribonuclease Inhibitor 569 757 IPR032675 -
Bach6g01484 869 Gene3D Ribonuclease Inhibitor 7 163 IPR032675 -
Bach6g01484 869 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 238 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01484 Bach-Chr6 18590151 18599384 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01484 737 769 Cytoplasmic Ribosomal Protein Gene Family AT2G32220 84.848 6.84e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01484 - - vum:124826602 352.829